PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.3080

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 354aa MW: 38594.9 Da PI: 8.4859

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.3080	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.3	6.3e-32	182	237	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmk++gLt+++vkSHLQkYRl+ evm.model.AsparagusV1_01.3080 182 KARRCWSPELHRRFLNALQQLGGSHVATPKQIRELMKIDGLTNDEVKSHLQKYRLH 237 68****************************************************97 PP
2	Myb_DNA-binding	43.5	7.4e-14	184	235	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ evm.model.AsparagusV1_01.3080 184 RRCWSPELHRRFLNALQQLGGShvaTPKQIRELMKiDGLTNDEVKSHLQKYR 235 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MDYLKALEEE RKKILVFERE LPLSLQLVTQ AIENCKKKND EVVGRGEEIA SEGPILEEFI 60 PLRPSCSSSD EENNHKNSGN SGGSDKKPDW MRSVQLWNQQ PEPKGDVVMR PIAVNAKRIG 120 GAFHPFEKEK VVVKTPVVAA APASSTTENT SGGNGGSGGS GGSGSGEERE REKEKEGTSQ 180 RKARRCWSPE LHRRFLNALQ QLGGSHVATP KQIRELMKID GLTNDEVKSH LQKYRLHTRR 240 PTASAVQNST NSSPQQPQIV LVGGIWMPPP QYNATQNAPL NTVFAPVASH PSQQPMHQSK 300 QKNNRSPTSP LNSKERCEGD DNSEDAEQTN SDSSATSSSS RTTTASAPLV RVC*

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MDYLKALEEE RKKILVFERE LPLSLQLVTQ AIENCKKKND EVVGRGEEIA SEGPILEEFI  60
PLRPSCSSSD EENNHKNSGN SGGSDKKPDW MRSVQLWNQQ PEPKGDVVMR PIAVNAKRIG  120
GAFHPFEKEK VVVKTPVVAA APASSTTENT SGGNGGSGGS GGSGSGEERE REKEKEGTSQ  180
RKARRCWSPE LHRRFLNALQ QLGGSHVATP KQIRELMKID GLTNDEVKSH LQKYRLHTRR  240
PTASAVQNST NSSPQQPQIV LVGGIWMPPP QYNATQNAPL NTVFAPVASH PSQQPMHQSK  300
QKNNRSPTSP LNSKERCEGD DNSEDAEQTN SDSSATSSSS RTTTASAPLV RVC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	9e-71	G2-like family protein