PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.3073 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 165aa MW: 18933.1 Da PI: 10.5019 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 101.3 | 5.6e-32 | 25 | 116 | 1 | 92 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 f+k+ tpsdv+k++rlv+pk++ae+h k +s l++ede g++W+++++y+++s++yvltkGW++Fvk++gLk+g +v evm.model.AsparagusV1_01.3073 25 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLKSGSLLLSFEDECGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLKAGGVV 104 99************************55567899********************************************** PP EEEE-SSSEE.. CS B3 81 vFkldgrsefel 92 vF+++ se++l evm.model.AsparagusV1_01.3073 105 VFRRSIGSEKQL 116 ***763355544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MEKGPEEVKG RRLSGSARRP AEPLFEKTVT PSDVGKLNRL VIPKQHAEKH FPLKSGSLLL 60 SFEDECGKVW RFRYSYWNSS QSYVLTKGWS RFVKEKGLKA GGVVVFRRSI GSEKQLYIEC 120 KAEKPVQVIR LFGVNMFEVP VKRKETELFS VLEEERALLK RRCL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68840.2 | 3e-57 | RAV family protein |