PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.3065 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 262aa MW: 29048.4 Da PI: 10.4097 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35.3 | 2.7e-11 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT+eE+ l+ +++++G g W+tI + R+ ++k++w++ evm.model.AsparagusV1_01.3065 5 KQKWTAEEESALKAGIRKHGAGKWRTILKDPEfsgilCLRSNVDLKDKWRN 55 79***********************************66**********99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MGAPKQKWTA EEESALKAGI RKHGAGKWRT ILKDPEFSGI LCLRSNVDLK DKWRNMSVVM 60 NGWGSREKGR IALKKSRQIP KHDDNPMALS TAVADSSDEI VDAKPLAMSA DAVQANAPNQ 120 SEAKLENLIL EAITNLKEPS GSNKTAIAMY IEDQYVSPPD FKRLLSAKLR RMTETRKLVK 180 VKRKYRIAPS SLYSEGRNSK VLLIDGRQRE HSRVDRDDIK HITKSQIDAY LARMRNMTPK 240 EAANAAALAI IPVLNGGDSC L* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 2e-90 | MYB_related family protein |