PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.2950 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | Nin-like | ||||||||
Protein Properties | Length: 898aa MW: 98962.3 Da PI: 5.8685 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 89 | 4e-28 | 547 | 598 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yFs+++kdAAk Lgvc+T++KriCRq+GI+RWP+Rki+++ evm.model.AsparagusV1_01.2950 547 AEKTISLEVLHRYFSGSLKDAAKALGVCPTTMKRICRQHGISRWPSRKINKV 598 589***********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 898 aa Download sequence |
MAERGAQPHP QIQSNGAREL MDFDAELDLA SWPLPSPSPP RPPSPVWWFD DGGSPVADFW 60 SAFAARGAND SDVANGNITQ EDVKKRKPQP EMCEDDSDDY CFIRKRMTQA LRYLKESAGQ 120 QILVQVWAPV KNGNKYVLTT SGQPFVLDPH SLGLHQYRTV SMTYVFSADG DGDGDLGLPG 180 RVFRGKMPEW TPDVQFYSSK EYPRLVHARN FDVRGTLALP VFEPSGHSCV GVVELIMTSR 240 KINYAPEVDK VCKALEAVNL KSYDISDIPS VQICNEGRQN AFAEILEILT TICEEHKLPI 300 AQTWVPCRHR NVLTYGGGSQ KSCSSFDGSC MGQVCMSTSD VAVYVIDPQM WGFRDACVEH 360 HLQKGQGVAG RAFESRSSCF SRDITQFSKT EYPLVHYARL FNLAGSLAVC LQSVHTGNDD 420 YILEFFLPPG CRDPVQQKVL LDSILNLMKQ CFRNLRISVN EDIQEGKSPG FFDVSETGNR 480 EHEPGLALGQ SCSTHVNANS PKDNPAQVEN LVPNRAKAVN TERNYTESAP SLVNLSAKKP 540 ERKRGKAEKT ISLEVLHRYF SGSLKDAAKA LGVCPTTMKR ICRQHGISRW PSRKINKVNR 600 SLSKLKRVIE SVQGAEGAFN LPSLSCQLPL AVSLDGCRHG GDGEPLSLQH AELDKDSLPH 660 KSLQSDDQSN NKKAQQETIR AHADSNVEPD KDSSKTISSG EGSSEAATSQ ESCEEVNVTD 720 SPNLNNGFNV NGFLGFSNPM PDASIEEPQP MLGRVLIEDS GSSKDLKNLF SSIVEGCHYE 780 NSVLYTNHEP SHPTEVQGLR TVTIKASYRE DIVRFRLPGS AGMMELSEEV AKRLKLEVGT 840 FDIRYLDEDQ EWVMLSCDAD LKECIEISRL SGLHIIRLSV HDVAPLLGSS CGSSAGQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 0.0 | Nin-like family protein |