PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.2725

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB_related

Protein Properties

Length: 871aa MW: 97014.4 Da PI: 4.492

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.2725	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.9	3.6e-11	695	737	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+W++ E el+++a++q+G++ + I r ++ +Rt+ q+k+++ evm.model.AsparagusV1_01.2725 695 RGKWSKSETELFYEAIRQFGTD-FGMIERLFP-NRTRHQVKLKFK 737 89******************.*****.*******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 871 aa Download sequence
MDNIFSEIAD DDSSFPLATT IANKLKPKPR FKPKKPAATS TNSSDSTVPV SKNEEVNLRQ 60 DAVVESKEPL SSVSESNKNS SEVDIEVPHG ETHVSKSDKV VSKMSIAFDV ESVPLIHPNA 120 SMATIAYKSQ PKPCLKPKKP AATFSNSSAA TWPDVIVECK EPCIVSESES NINFSDAVVR 180 RESEAEKEVP HGETHVSEVL IESHMEVGPL FHPDAPMAVA EPVSASHLCS SGSVAMDISS 240 VVSEAQEAVN LSSGLLSHEV ASQDISQVSK WEGNLQSDPA KPEKAAMPVL LGMELHADIF 300 SESTDIAAVK KVSKFQPKAG SRQKKQAKSV SFILPDAADT AATPVEPESV SQLNEEESMS 360 LSFSPPDSDK APHTTSIISD NVDFQLDQGS ANEKLADFSD PESFESILTT SDLVSGKVAR 420 KLQPRRGAKT KTKTEKSNSS DNTNDAKENS SHLESLPMDT EALEDHNLSV PTETLRSLTD 480 EQAEPVEMSS IEAGSPEFEA IDTLDGDPWH DEEQAEAENR DVETLNNSQM DEDLNDDDYR 540 GEDKPKQKRQ PKRVKKQMID AQEPSKRLKK TFKEPDSTEA EPPKKRFPHG TRRKRRQLDK 600 ALLETPDYEI DRRQIAIKQL ILLGEANEKN ASKEATASGN NGSNIGSFPS DTHYDPDNLF 660 DEDLYRNANA EEEHLNRLRS IPKVNYHSHM TKLQRGKWSK SETELFYEAI RQFGTDFGMI 720 ERLFPNRTRH QVKLKFKSEE RRHPSELRDA MSHRSKDLSH FETVIQQLKA QAEEESRQDD 780 ANDEPTSIPQ ETADANKEAR DQLEKEEQEA NEFEEVPGAG KVDDWNGDEW NGDEWKGDDT 840 TDLNEYEDIE WNIGASPQNE EKYSEYDEYY *

Sequence ? help Back to Top

Protein Sequence Length: 871 aa Download sequence

MDNIFSEIAD DDSSFPLATT IANKLKPKPR FKPKKPAATS TNSSDSTVPV SKNEEVNLRQ  60
DAVVESKEPL SSVSESNKNS SEVDIEVPHG ETHVSKSDKV VSKMSIAFDV ESVPLIHPNA  120
SMATIAYKSQ PKPCLKPKKP AATFSNSSAA TWPDVIVECK EPCIVSESES NINFSDAVVR  180
RESEAEKEVP HGETHVSEVL IESHMEVGPL FHPDAPMAVA EPVSASHLCS SGSVAMDISS  240
VVSEAQEAVN LSSGLLSHEV ASQDISQVSK WEGNLQSDPA KPEKAAMPVL LGMELHADIF  300
SESTDIAAVK KVSKFQPKAG SRQKKQAKSV SFILPDAADT AATPVEPESV SQLNEEESMS  360
LSFSPPDSDK APHTTSIISD NVDFQLDQGS ANEKLADFSD PESFESILTT SDLVSGKVAR  420
KLQPRRGAKT KTKTEKSNSS DNTNDAKENS SHLESLPMDT EALEDHNLSV PTETLRSLTD  480
EQAEPVEMSS IEAGSPEFEA IDTLDGDPWH DEEQAEAENR DVETLNNSQM DEDLNDDDYR  540
GEDKPKQKRQ PKRVKKQMID AQEPSKRLKK TFKEPDSTEA EPPKKRFPHG TRRKRRQLDK  600
ALLETPDYEI DRRQIAIKQL ILLGEANEKN ASKEATASGN NGSNIGSFPS DTHYDPDNLF  660
DEDLYRNANA EEEHLNRLRS IPKVNYHSHM TKLQRGKWSK SETELFYEAI RQFGTDFGMI  720
ERLFPNRTRH QVKLKFKSEE RRHPSELRDA MSHRSKDLSH FETVIQQLKA QAEEESRQDD  780
ANDEPTSIPQ ETADANKEAR DQLEKEEQEA NEFEEVPGAG KVDDWNGDEW NGDEWKGDDT  840
TDLNEYEDIE WNIGASPQNE EKYSEYDEYY *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	6e-43	MYB_related family protein