PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.243

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 350aa MW: 38924.6 Da PI: 8.2854

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.243	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	84.4	1e-26	207	268	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqKe+ +++pr+Y+rC+++ gC ++k+v++s+++p+++e+tY+g+H+++ evm.model.AsparagusV1_01.243 207 LDDGFSWRKYGQKEILRTKHPRGYFRCSHRqsqGCLATKQVQQSDDNPTIFEVTYRGSHTCQ 268 59*************************98899************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MVKSMNMLLN ELGRGYKLVR ELDAKLNLDS IELCASLVQD ILDCFENVMS MAKANAPTDS 60 PRLFTLSPQH GVSEQPFKAE HNLLLARLLL TEKAKMVKSM NMLLNELARG YKLVRELDAK 120 LNLDSIELCA SLVQDILDCF ENVMAMAKAN APTGSPRLFT LSPQHGVSEQ PFKAEHKEMA 180 SKKRKMQRKG TSRQVKLGSG PEAEGPLDDG FSWRKYGQKE ILRTKHPRGY FRCSHRQSQG 240 CLATKQVQQS DDNPTIFEVT YRGSHTCQRT SSPQTSLKVK SDNLNYKVPA PTHSSSFSFP 300 STPIIDFTET LSAMTSANSS PMMDVDFLMH SSSELGVTFD AFDASNFLL*

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MVKSMNMLLN ELGRGYKLVR ELDAKLNLDS IELCASLVQD ILDCFENVMS MAKANAPTDS  60
PRLFTLSPQH GVSEQPFKAE HNLLLARLLL TEKAKMVKSM NMLLNELARG YKLVRELDAK  120
LNLDSIELCA SLVQDILDCF ENVMAMAKAN APTGSPRLFT LSPQHGVSEQ PFKAEHKEMA  180
SKKRKMQRKG TSRQVKLGSG PEAEGPLDDG FSWRKYGQKE ILRTKHPRGY FRCSHRQSQG  240
CLATKQVQQS DDNPTIFEVT YRGSHTCQRT SSPQTSLKVK SDNLNYKVPA PTHSSSFSFP  300
STPIIDFTET LSAMTSANSS PMMDVDFLMH SSSELGVTFD AFDASNFLL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.2	2e-42	WRKY family protein