PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.240
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 277aa    MW: 31210.4 Da    PI: 7.0475
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.240genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.51.1e-161461148
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                  +g WT+eEd++l+ + + +G g+W++++++ g++R++k+c++rw +yl
  evm.model.AsparagusV1_01.240 14 KGLWTEEEDLKLIAYTNTHGIGNWTSVPKKAGLKRCGKSCRLRWTNYL 61
                                  678*******************************************97 PP

2Myb_DNA-binding482.9e-1569110346
                                   SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
               Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                                   ++T++E+e ++ +++  G++ W+ Ia++++ gRt++++k++w++
  evm.model.AsparagusV1_01.240  69 SFTQQEEEMIITLHATIGSR-WSVIAHHLP-GRTDNDIKNHWNT 110
                                   79******************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MGRPPCCDKS NVKKGLWTEE EDLKLIAYTN THGIGNWTSV PKKAGLKRCG KSCRLRWTNY  60
LRPNLKHESF TQQEEEMIIT LHATIGSRWS VIAHHLPGRT DNDIKNHWNT KLSKKLCQQG  120
IDPVTHKPIS QIKETITTLA AAAAANHHLL IHPPPFNTRV NSCLSRDLKN VLLSKPQQFY  180
EPTTATSTTL DEVYKQDKEI KWSDYLVDDV FVPNQEKELV VNGYGKEKVT SAVDEEVSST  240
VFGGEGSSSS SSFVEGILDQ GREMMMEFPE FFYDLL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.18e-73MYB family protein