PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.2285

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 178aa MW: 20371.4 Da PI: 7.9657

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.2285	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.1e-30	95	153	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk+s++pr+YYrC ++gC+vkk+ver+++d ++v +tYeg Hnh+ evm.model.AsparagusV1_01.2285 95 MDDGYKWRKYGKKMVKNSPNPRNYYRCLTEGCSVKKRVERARDDSSYVLTTYEGIHNHN 153 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MSSYSSLLSS NSSENDKPED TFEIDDYLTF NEEVQESHLS GPYKPNQLLP VTTDGHADQR 60 SVNVCNRKNK YMEQDTSTGR KWKVAFRTKS EIETMDDGYK WRKYGKKMVK NSPNPRNYYR 120 CLTEGCSVKK RVERARDDSS YVLTTYEGIH NHNVPLQGAC SYHAVNSTSQ YHSLSSQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	9e-38	WRKY family protein