PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.2272
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 123aa    MW: 13655.3 Da    PI: 8.8218
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.2272genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.83e-301876159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                           WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                                   ldDg++WrKYG+K+vk+s++pr+YYrC+ +gC vkk+ver++ed+ +v++tY g Hnh+
  evm.model.AsparagusV1_01.2272 18 LDDGFKWRKYGKKSVKNSPNPRNYYRCSNEGCGVKKRVERDREDNLYVITTYDGVHNHP 76
                                   59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MDAGCRIGFR MKSEVEILDD GFKWRKYGKK SVKNSPNPRN YYRCSNEGCG VKKRVERDRE  60
DNLYVITTYD GVHNHPSPGS ICCNFGAHHQ GDAFGLVSFG RGQMPLIAPN PWSTVHSANS  120
SC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.13e-37WRKY family protein