PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.2261

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 420aa MW: 46949.6 Da PI: 9.2667

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.2261	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.6	3.4e-30	271	329	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+aed +++++tYeg+Hnh+ evm.model.AsparagusV1_01.2261 271 HDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCAEDMSILITTYEGTHNHP 329 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MEVVPKRTSV KVERRMESSP CVSVEEVEKI GNEKKIAEGS FKSSSPNRKD SSTTNQVSTA 60 IASERSSTGT SSRLSPTNPK ESDTAINLQE ELQLESTKAE MGEVREENER LKALLAKIVK 120 DYQSLQMHFF DIVQQEQAKK PSEPPPPPPP PPASTYTEEP ELVSLSLGTS SSLNKKEEKV 180 TSKRKSTEQI EEGLTLGLTN SPNEPVSSNM SPSNSVDNDQ GKEEEPGEPW PPSKILKSLR 240 NGADVEEGLQ QAHVKKTRVS VRARCDAPTM HDGCQWRKYG QKIAKGNPCP RAYYRCTVAP 300 ACPVRKQVQR CAEDMSILIT TYEGTHNHPL PISATAIRLL HLPLLPHRIP AFLCWSFLPL 360 LLNRKPPRVK FQLIRFKFPK PSFLPPKPYN IIYPLLPYYY PRPHLTPTNN LSTTITIQH*

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MEVVPKRTSV KVERRMESSP CVSVEEVEKI GNEKKIAEGS FKSSSPNRKD SSTTNQVSTA  60
IASERSSTGT SSRLSPTNPK ESDTAINLQE ELQLESTKAE MGEVREENER LKALLAKIVK  120
DYQSLQMHFF DIVQQEQAKK PSEPPPPPPP PPASTYTEEP ELVSLSLGTS SSLNKKEEKV  180
TSKRKSTEQI EEGLTLGLTN SPNEPVSSNM SPSNSVDNDQ GKEEEPGEPW PPSKILKSLR  240
NGADVEEGLQ QAHVKKTRVS VRARCDAPTM HDGCQWRKYG QKIAKGNPCP RAYYRCTVAP  300
ACPVRKQVQR CAEDMSILIT TYEGTHNHPL PISATAIRLL HLPLLPHRIP AFLCWSFLPL  360
LLNRKPPRVK FQLIRFKFPK PSFLPPKPYN IIYPLLPYYY PRPHLTPTNN LSTTITIQH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	4e-53	WRKY family protein