PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.2223

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 364aa MW: 40967.5 Da PI: 8.9317

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.2223	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	85.7	4.2e-27	150	201	1	52
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitY 52 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aed ++v++t evm.model.AsparagusV1_01.2223 150 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDARMVITTI 201 59**********************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MRPSTTSFMP INEGLVESQE TSHMSFFSQP SPLPHPHLSF PLYGLQNSLE TLAPPRVNGV 60 VEFSSNLKDL GSSFSIQETT STINPLSSST REDAHNISNK SSNISTINNR SYNENLSSVG 120 AKRMKKVMKA RRKVREPRFC FKTMSEVDVL DDGYKWRKYG QKVVKNTQHP RSYYRCTQDN 180 CRVKKRVERL AEDARMVITT IELQATEALL HADSIQAIAP GHQSCIRTSK LHQMMHLYNQ 240 IRQGGEEVVD YDSNDCLDDP YDLSHAVAEP KLGVDTTTTS MPTPIIESSI SIEDMSTSES 300 NGDVMTSELP KETKLRVKLK PKAQPKKRVN LQLRLRSRPK LKLLLSVINL QSGYNDNDDC 360 IAF*

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MRPSTTSFMP INEGLVESQE TSHMSFFSQP SPLPHPHLSF PLYGLQNSLE TLAPPRVNGV  60
VEFSSNLKDL GSSFSIQETT STINPLSSST REDAHNISNK SSNISTINNR SYNENLSSVG  120
AKRMKKVMKA RRKVREPRFC FKTMSEVDVL DDGYKWRKYG QKVVKNTQHP RSYYRCTQDN  180
CRVKKRVERL AEDARMVITT IELQATEALL HADSIQAIAP GHQSCIRTSK LHQMMHLYNQ  240
IRQGGEEVVD YDSNDCLDDP YDLSHAVAEP KLGVDTTTTS MPTPIIESSI SIEDMSTSES  300
NGDVMTSELP KETKLRVKLK PKAQPKKRVN LQLRLRSRPK LKLLLSVINL QSGYNDNDDC  360
IAF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	3e-40	WRKY family protein