PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.2180 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | BES1 | ||||||||
Protein Properties | Length: 151aa MW: 17425.8 Da PI: 10.269 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 110 | 4.1e-34 | 34 | 121 | 3 | 90 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaa 82 s+r+p+ +ErE n++RE rRR ia kiy+GLRaqG+++lpk+ D n++l ALc++AG+ ve+DG + rk + ee++ evm.model.AsparagusV1_01.2180 34 SRRRPSDREREANRLREQRRRRIANKIYSGLRAQGGFRLPKHPDRNDILIALCEQAGYQVEEDGSVSRKKLNSFEETSEN 113 79******************************************************************999988555555 PP DUF822 83 gssasasp 90 g +s + evm.model.AsparagusV1_01.2180 114 GDKRSLKE 121 55444333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MERNVTVKRK GCIKLTKGDW VVRRKGKGGV ISISRRRPSD REREANRLRE QRRRRIANKI 60 YSGLRAQGGF RLPKHPDRND ILIALCEQAG YQVEEDGSVS RKKLNSFEET SENGDKRSLK 120 EASLSYEIEV QPELEEEQLS LDLTLSYKYM * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 35 | 55 | RRRPSDREREANRLREQRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19350.3 | 6e-16 | BES1 family protein |