PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.2114

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB_related

Protein Properties

Length: 922aa MW: 101686 Da PI: 6.4758

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.2114	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.4	3.9e-09	46	85	3	44
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 rW +eE ++++ a++ +G++ W+++a+ +g +R+ ++ s + evm.model.AsparagusV1_01.2114 46 RWNKEELKQFYAAFRTYGKN-WRKVAELIG-NRSIDMVESLY 85 8***************99.*****.*98887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 922 aa Download sequence
MGPTKMSRMV NKRTSKASKE WPDKVVTNAN KSKVKKRKLS DMLDYRWNKE ELKQFYAAFR 60 TYGKNWRKVA ELIGNRSIDM VESLYNLNKA YLNLPEGMAT ADGFIAMMTD HYNNLDGSDN 120 EYERKGAPSK ILKPVKSSCA KRELDILKRS DGPCLQNQSV KSSHGCKTKK HLQAFFTDCW 180 PRAVQKRTPR VPITHSQGDG DNFVSASKCI LKSAHDEHTH TEALTLTNGP HGGDSSLISG 240 FQQRSKLIES IKEMCAETDM TNSSDISKKP DDNCLEGCSG RRDADNGLLG NDIRVQDADR 300 IDQSVTQCSA VDPLQILADV SLNIGLEGSA CESLQESSLH GAKQKGGNGF SCHFNKHGSL 360 SANPENDNSK FSVQGVGELF SVQKSNLPGS VTGFHELVNS RISYSRDTEY SSTDFNKTNE 420 SETLLANPES HKPKILVEVD QEYPSSVRYD EILSKEAKLQ QVITPDENTV GKTVSDAEEA 480 KGPHVTMMEK SFAENIAEIE GHAYSSLDES EKKENVGQCL GNQNGIAARF CEVSGKNQDA 540 CFQERELRNP AKFNVLPKEL HDKIVLDQSL DANGISLNPS FKLLCITSMK QATGETVNAI 600 LKATPCADEE VASSPHKRCS QPCMLAKVQS RESDIKTIAD LTRALDKKEE VLKELRQMND 660 VVYGRTDEAL GAESNHVIEH YRKIVKLLNE VNDEVASASY NLRQRNTYIK NSTAPKFSLL 720 KDSTEYDGLP GTLSAEYLSS QNSSLYIEEI VTNAREKART MVDTAVLTMS SLKEGEDAHI 780 RIRGALDSAV NDQSGLDSKL LGTRYSCSAP SAYQNRAPSF TATANAPKGA CLSSANESEI 840 LSALMSECIA TMFMIQNTSE RRFPPADIAR ILEHAVESLQ PRCSQNLPVY RDIEKCMGYI 900 KTQMLSLIET PNTSLPTGIS V*

Sequence ? help Back to Top

Protein Sequence Length: 922 aa Download sequence

MGPTKMSRMV NKRTSKASKE WPDKVVTNAN KSKVKKRKLS DMLDYRWNKE ELKQFYAAFR  60
TYGKNWRKVA ELIGNRSIDM VESLYNLNKA YLNLPEGMAT ADGFIAMMTD HYNNLDGSDN  120
EYERKGAPSK ILKPVKSSCA KRELDILKRS DGPCLQNQSV KSSHGCKTKK HLQAFFTDCW  180
PRAVQKRTPR VPITHSQGDG DNFVSASKCI LKSAHDEHTH TEALTLTNGP HGGDSSLISG  240
FQQRSKLIES IKEMCAETDM TNSSDISKKP DDNCLEGCSG RRDADNGLLG NDIRVQDADR  300
IDQSVTQCSA VDPLQILADV SLNIGLEGSA CESLQESSLH GAKQKGGNGF SCHFNKHGSL  360
SANPENDNSK FSVQGVGELF SVQKSNLPGS VTGFHELVNS RISYSRDTEY SSTDFNKTNE  420
SETLLANPES HKPKILVEVD QEYPSSVRYD EILSKEAKLQ QVITPDENTV GKTVSDAEEA  480
KGPHVTMMEK SFAENIAEIE GHAYSSLDES EKKENVGQCL GNQNGIAARF CEVSGKNQDA  540
CFQERELRNP AKFNVLPKEL HDKIVLDQSL DANGISLNPS FKLLCITSMK QATGETVNAI  600
LKATPCADEE VASSPHKRCS QPCMLAKVQS RESDIKTIAD LTRALDKKEE VLKELRQMND  660
VVYGRTDEAL GAESNHVIEH YRKIVKLLNE VNDEVASASY NLRQRNTYIK NSTAPKFSLL  720
KDSTEYDGLP GTLSAEYLSS QNSSLYIEEI VTNAREKART MVDTAVLTMS SLKEGEDAHI  780
RIRGALDSAV NDQSGLDSKL LGTRYSCSAP SAYQNRAPSF TATANAPKGA CLSSANESEI  840
LSALMSECIA TMFMIQNTSE RRFPPADIAR ILEHAVESLQ PRCSQNLPVY RDIEKCMGYI  900
KTQMLSLIET PNTSLPTGIS V*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	2e-47	MYB_related family protein