PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.1957

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 414aa MW: 46486.4 Da PI: 6.4436

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.1957	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	69.3	5.5e-22	269	331	3	59
-SS-EEEEEEE--TT-SS.-EEEEEE-ST.....T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsef.prsYYrCtsa.....gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYG K++k s + r YY+C+ + +C++k+++er+++dp++++i Y geHnh+ evm.model.AsparagusV1_01.1957 269 DFWAWRKYGEKKIKHSANiHREYYKCSNNdtkktNCQAKRRIERNSDDPQTLTIAYAGEHNHQ 331 99**********987538**988777889*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MEWDDGDLMS IVQSCSLMKG KALVTTFDSF SHRPPLSPRP IPSSILEESM LPMVSNSFSL 60 LSPPLTSPPI RIEGRMLPVI ANPFDPSSNL LPLSPPPLPS LRMEEIMLPA ISNPFDLFSN 120 LLPLSPPPHP PPLPPMRNKE ALMSMESNSF DSFSNLLHLS PPPLPPMRNK EVMMSMESNS 180 FDPFSNLLPL SPHQSFISMD EKMSPLTSSS CSFLPPLHQP LFPMKKEERI KNPRMTAKVK 240 RREKPKIRNG GLKWEVKKVC LDKNIIFGDF WAWRKYGEKK IKHSANIHRE YYKCSNNDTK 300 KTNCQAKRRI ERNSDDPQTL TIAYAGEHNH QLPIRRHSHS RPSEDVFSPL SVLLPTTTSP 360 SVEEEEEDDG DVADVEVADD EGFFLKESGC SKLKMKEMAI AIASSSSALD DED*

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MEWDDGDLMS IVQSCSLMKG KALVTTFDSF SHRPPLSPRP IPSSILEESM LPMVSNSFSL  60
LSPPLTSPPI RIEGRMLPVI ANPFDPSSNL LPLSPPPLPS LRMEEIMLPA ISNPFDLFSN  120
LLPLSPPPHP PPLPPMRNKE ALMSMESNSF DSFSNLLHLS PPPLPPMRNK EVMMSMESNS  180
FDPFSNLLPL SPHQSFISMD EKMSPLTSSS CSFLPPLHQP LFPMKKEERI KNPRMTAKVK  240
RREKPKIRNG GLKWEVKKVC LDKNIIFGDF WAWRKYGEKK IKHSANIHRE YYKCSNNDTK  300
KTNCQAKRRI ERNSDDPQTL TIAYAGEHNH QLPIRRHSHS RPSEDVFSPL SVLLPTTTSP  360
SVEEEEEDDG DVADVEVADD EGFFLKESGC SKLKMKEMAI AIASSSSALD DED*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23550.1	1e-17	WRKY family protein