PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.1852 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | G2-like | ||||||||
Protein Properties | Length: 179aa MW: 19590.8 Da PI: 4.4959 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 44.6 | 3.1e-14 | 130 | 161 | 1 | 33 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktil 33 k++++WtpeLH+rFv+aveqL G +kA+P++il evm.model.AsparagusV1_01.1852 130 KAKVDWTPELHRRFVQAVEQL-GVDKAVPSRIL 161 6799*****************.*********98 PP | |||||||
2 | Myb_DNA-binding | 24.7 | 5.4e-08 | 133 | 159 | 2 | 26 |
SSS-HHHHHHHHHHHHHTTTT..-HHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWkt 26 WT+e++ ++v+av+qlG + +++ evm.model.AsparagusV1_01.1852 133 VDWTPELHRRFVQAVEQLGVDkaVPSR 159 67*****************88555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MLAVSPIRRS SNNNGDNNEG EFLLEDINFD DIFAGFENGD ILPDLEIDSS DIFADFSFSS 60 GEESVNTAAV PDQEKISCYQ NESRIEDKDV EVVSARKKEI DQKSASSEGG KGRKHTSATT 120 GGKESQGKKK AKVDWTPELH RRFVQAVEQL GVDKAVPSRI LXXXPPQYRQ PSAEISVA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44190.1 | 5e-19 | G2-like family protein |