PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.1610 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WRKY | ||||||||
Protein Properties | Length: 286aa MW: 31262.7 Da PI: 5.2549 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.6 | 6.2e-29 | 123 | 181 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s gCp++k+ver++ +p ++itY+++Hnh+ evm.model.AsparagusV1_01.1610 123 SDIWAWRKYGQKPIKGSPYPRGYYRCSSYrGCPARKQVERNRAEPGQLIITYTSDHNHP 181 79************************9877****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence |
MDAVDDWDLS ARGQRLLLQG KIPAAEPPSA KENPFSRGDE RGNEIFANFP SDVFANSSFF 60 GGLEDLYTPF LLKNTSLRVG PAVGAPKKPQ RSPATAAQPP RSKRRKKNVK KVVCQVPADG 120 VSSDIWAWRK YGQKPIKGSP YPRGYYRCSS YRGCPARKQV ERNRAEPGQL IITYTSDHNH 180 PVPTRHQNPS QPTAANSKEA DQPPPSPATS PSMEEDEGEL MVEDMEMIGE HELVFVGDGS 240 EENKVQENGL SSTLLFDDDD DDDRVFGSPW LEKSNSGGNA TAAAC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 2e-43 | WRKY family protein |