PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.1471 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 222aa MW: 24586.6 Da PI: 5.9427 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32 | 2.9e-10 | 41 | 86 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+ eEd +v +lG+ +W+ Ia+ + gR++k+ck+rw + evm.model.AsparagusV1_01.1471 41 KGPWSSEEDAVQSILVIKLGTWNWNFIAQGIA-GRSRKSCKLRWCNQ 86 79******************************.***********985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MEEEEEEQVH EAVMIGDDDS ANVGGRASMA TTMEGREEKV KGPWSSEEDA VQSILVIKLG 60 TWNWNFIAQG IAGRSRKSCK LRWCNQLAPY AEGGHTGPPS NFKSYLQDSD FTNYVVSVTS 120 FSSSFKNYSD GDNLLLDTFH RYSVTPSTTK TPSPSTPSAG TSSPPTSPPT PHFLFLYSVH 180 NITIRVFIKV DDFDFHLLKL MWSAAAYLFV IKAKVLRGEK M* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09230.1 | 1e-20 | MYB family protein |