PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.1454

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

E2F/DP

Protein Properties

Length: 390aa MW: 43529 Da PI: 6.6793

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.1454	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.1	1.1e-26	110	175	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r ++sL+llt+kfl+ll+++e+g+++ln +a+ L dv ++RRiYDi+NVLe+++liekk kn irwkg evm.model.AsparagusV1_01.1454 110 RFDSSLGLLTKKFLNLLQQAEDGTLDLNRAAEIL---DV--QKRRIYDITNVLEGVGLIEKKLKNMIRWKG 175 6789****************************.....****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MPEIEGSSIH LSRLQLRSPL SLGRLSARFS AALENDRISR KSSNVKEVCE VEFLRAVQQG 60 HTAAVSHMLP PVTSSKSKHH KKPKASKRNE FRQEHTQSVD GSASAANNCR FDSSLGLLTK 120 KFLNLLQQAE DGTLDLNRAA EILDVQKRRI YDITNVLEGV GLIEKKLKNM IRWKGNDISR 180 PKELSDQIDG LKAEVETLHT DECRVDEMIR EMQETLRTMS EDERISKRLF VMEEDINKLP 240 CFEDATVIAI KAPYGTSVEV PDPDESIDRS QRHFQLLLRS SLGPISCYLV RNHGGRVKDS 300 SPSQQTAALN LPNKANRNHC RDETSLQQTT NRQGRDQTSP VLLSGSFSSL DSSGGVLKIL 360 PSDVDIDADY FLLSEPTVSV SESWTAYVE*

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MPEIEGSSIH LSRLQLRSPL SLGRLSARFS AALENDRISR KSSNVKEVCE VEFLRAVQQG  60
HTAAVSHMLP PVTSSKSKHH KKPKASKRNE FRQEHTQSVD GSASAANNCR FDSSLGLLTK  120
KFLNLLQQAE DGTLDLNRAA EILDVQKRRI YDITNVLEGV GLIEKKLKNM IRWKGNDISR  180
PKELSDQIDG LKAEVETLHT DECRVDEMIR EMQETLRTMS EDERISKRLF VMEEDINKLP  240
CFEDATVIAI KAPYGTSVEV PDPDESIDRS QRHFQLLLRS SLGPISCYLV RNHGGRVKDS  300
SPSQQTAALN LPNKANRNHC RDETSLQQTT NRQGRDQTSP VLLSGSFSSL DSSGGVLKIL  360
PSDVDIDADY FLLSEPTVSV SESWTAYVE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.3	9e-70	E2F/DP family protein