PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.1427

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 475aa MW: 53670.8 Da PI: 7.0301

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.1427	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.1	7.1e-32	104	157	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ evm.model.AsparagusV1_01.1427 104 PRLRWTPDLHSSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 157 8****************************************************7 PP
2	Myb_DNA-binding	46.9	6.5e-15	105	156	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg t+k++ + m+ g++ ++ks++q+y+ evm.model.AsparagusV1_01.1427 105 RLRWTPDLHSSFVHAVERLGGQeraTPKLVLQLMNvRGLSIAHVKSHLQMYR 156 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MGDDKEKEAM VEICEDKERL LPVIDLNEDK AEEECNKYAE NQEQNKEDDD SDDEDDEQSI 60 NTEIGGGGSS SSTNNNNNEE SKISVGSGDE RAPTVRQYVR SKMPRLRWTP DLHSSFVHAV 120 ERLGGQERAT PKLVLQLMNV RGLSIAHVKS HLQMYRSKKL DDSGQERSVI SSAFSSMDNY 180 MRRGDHFNNM FYHREVSHHL PFRMERNIHE NERFYSLLQR CQSLHHPLDV NNSRFRHQEW 240 AFTQQAGTRI GSVKEKIVWK EGKPLASHLF DVRDTITGNG CSRSIHGHFL DGRRNAGFDW 300 IASSSKTLSK DGNSNLAMAT GSLSEWPGRT NLNSYKRLHS TSSDPIVIND GIQHRADLPF 360 RFGQVQNSKF NEIFARRENQ LTDMKRRRMM KESDSVPNLK LGLSPGSVGD SADVKKKIPE 420 ADQEVDSVLS LSLSPPNPSP KKLHQIEFLE RGTSKKAAMG TSTLDLTMSI KALQ*

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MGDDKEKEAM VEICEDKERL LPVIDLNEDK AEEECNKYAE NQEQNKEDDD SDDEDDEQSI  60
NTEIGGGGSS SSTNNNNNEE SKISVGSGDE RAPTVRQYVR SKMPRLRWTP DLHSSFVHAV  120
ERLGGQERAT PKLVLQLMNV RGLSIAHVKS HLQMYRSKKL DDSGQERSVI SSAFSSMDNY  180
MRRGDHFNNM FYHREVSHHL PFRMERNIHE NERFYSLLQR CQSLHHPLDV NNSRFRHQEW  240
AFTQQAGTRI GSVKEKIVWK EGKPLASHLF DVRDTITGNG CSRSIHGHFL DGRRNAGFDW  300
IASSSKTLSK DGNSNLAMAT GSLSEWPGRT NLNSYKRLHS TSSDPIVIND GIQHRADLPF  360
RFGQVQNSKF NEIFARRENQ LTDMKRRRMM KESDSVPNLK LGLSPGSVGD SADVKKKIPE  420
ADQEVDSVLS LSLSPPNPSP KKLHQIEFLE RGTSKKAAMG TSTLDLTMSI KALQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-35	G2-like family protein