PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.12
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 540aa    MW: 58243.7 Da    PI: 8.2143
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.12genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.36.4e-28196252259
                                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                  +DgynWrKYGqK+vk+s+ +rsYY+Ct  +C +kkkver+  d++ +ei+Y+g+Hnh+
  evm.model.AsparagusV1_01.12 196 SDGYNWRKYGQKQVKSSDRSRSYYKCTNVTCFAKKKVERCP-DGRETEIIYRGQHNHD 252
                                  7****************************************.***************7 PP

2WRKY106.41.5e-33370427259
                                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                  +Dgy+WrKYGqK vkg+++prsYYrCt++gCpv+k+ver+++d k+v itYeg+Hnh+
  evm.model.AsparagusV1_01.12 370 SDGYRWRKYGQKFVKGNPNPRSYYRCTHNGCPVRKHVERASDDAKAVLITYEGKHNHD 427
                                  7********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    
MSARDPDPVK EEKQKPPPPA PPPVTSPPET LASPNSASPV AARDNGRAVR FSSFSFAFGH  60
DRVRISVGNK IPKRTLLHRH HGLQNKLENE KGKEGGKIPI QLIFIVIGQF AMTHQAVLAT  120
VTAQAQMQLQ AARPSSSEAL PSPSPEPASI NPAPLQQRPS SVSEGNISTP EPMQPPPSDH  180
KSEAQSTQIV VKTSSSDGYN WRKYGQKQVK SSDRSRSYYK CTNVTCFAKK KVERCPDGRE  240
TEIIYRGQHN HDPPQKTTKS IKEKGVQSGG SSGEHKTADL PSNEVKGPDP STSKMEKNSS  300
NEALEQHLFC SSDCEGDAAI KMDEEHADEP DAKRRLIETQ SYTPCSAPVL RTIKEPKIVV  360
QSSCDATRIS DGYRWRKYGQ KFVKGNPNPR SYYRCTHNGC PVRKHVERAS DDAKAVLITY  420
EGKHNHDQPA LKSGCTEQPA TALLIAAAAS ATYSVTKDEK SHTSDSSPNK ELPTPTNGES  480
AGDNASLEAG GEKALESAQT LLSIGFNSSS GEEATGTNSD GVNPSIFSET CAAVPVQNS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.17e-73WRKY family protein