PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.12 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WRKY | ||||||||
Protein Properties | Length: 540aa MW: 58243.7 Da PI: 8.2143 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 88.3 | 6.4e-28 | 196 | 252 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+s+ +rsYY+Ct +C +kkkver+ d++ +ei+Y+g+Hnh+ evm.model.AsparagusV1_01.12 196 SDGYNWRKYGQKQVKSSDRSRSYYKCTNVTCFAKKKVERCP-DGRETEIIYRGQHNHD 252 7****************************************.***************7 PP | |||||||
2 | WRKY | 106.4 | 1.5e-33 | 370 | 427 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vkg+++prsYYrCt++gCpv+k+ver+++d k+v itYeg+Hnh+ evm.model.AsparagusV1_01.12 370 SDGYRWRKYGQKFVKGNPNPRSYYRCTHNGCPVRKHVERASDDAKAVLITYEGKHNHD 427 7********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 540 aa Download sequence |
MSARDPDPVK EEKQKPPPPA PPPVTSPPET LASPNSASPV AARDNGRAVR FSSFSFAFGH 60 DRVRISVGNK IPKRTLLHRH HGLQNKLENE KGKEGGKIPI QLIFIVIGQF AMTHQAVLAT 120 VTAQAQMQLQ AARPSSSEAL PSPSPEPASI NPAPLQQRPS SVSEGNISTP EPMQPPPSDH 180 KSEAQSTQIV VKTSSSDGYN WRKYGQKQVK SSDRSRSYYK CTNVTCFAKK KVERCPDGRE 240 TEIIYRGQHN HDPPQKTTKS IKEKGVQSGG SSGEHKTADL PSNEVKGPDP STSKMEKNSS 300 NEALEQHLFC SSDCEGDAAI KMDEEHADEP DAKRRLIETQ SYTPCSAPVL RTIKEPKIVV 360 QSSCDATRIS DGYRWRKYGQ KFVKGNPNPR SYYRCTHNGC PVRKHVERAS DDAKAVLITY 420 EGKHNHDQPA LKSGCTEQPA TALLIAAAAS ATYSVTKDEK SHTSDSSPNK ELPTPTNGES 480 AGDNASLEAG GEKALESAQT LLSIGFNSSS GEEATGTNSD GVNPSIFSET CAAVPVQNS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13960.1 | 7e-73 | WRKY family protein |