PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1155
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family DBB
Protein Properties Length: 209aa    MW: 23104.8 Da    PI: 7.043
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1155genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box223.4e-07333434
                       zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeH 34
                                   ++C+ +e+  + lfC  ++  lC +C  + H
  evm.model.AsparagusV1_01.1155  3 TICDACESAAAVLFCAADEAALCTSCDHKVH 33
                                   68*************************9988 PP
2zf-B_box27.18.4e-095291237
                       zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37
                                   e ++C+ +e+ ++ ++Ce +++ lC +C +  H g    H
  evm.model.AsparagusV1_01.1155 52 EVPRCDICENAPAFFYCEIDGTSLCLQCDMIVHVGgkrsH 91
                                   789***************************9995544556 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MRTICDACES AAAVLFCAAD EAALCTSCDH KVHMCNKLAS RHVRVGLADP SEVPRCDICE  60
NAPAFFYCEI DGTSLCLQCD MIVHVGGKRS HGRYLLLRQM VEFPGDIQSH VENGKDQNHE  120
LIMKERMQNH MVSAAAPLDA NSDGHGKIGT KMIDLNTRPY RTLGQASSSR VCILCIIIII  180
VIIFTVSTLH LRNRNFLTTN FIILFSHE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.12e-73DBB family protein