PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.1007 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 245aa MW: 27199.8 Da PI: 5.9298 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.4 | 6.1e-09 | 78 | 125 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RR+r+N++f +L ++l ++ + ++ +K++iL A + + +L evm.model.AsparagusV1_01.1007 78 SKACREKMRRERLNDRFLQLSSVLDPD---RPPRSDKVSILGDAARLLMQL 125 6789**********************9...99************9999888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MDPSPISDYW IDWIDDVGVG SDVDLRSALE TFCDISPANG YFRSTSVRSP EEYGGGCGVD 60 PTGSKKRGRD DACPGPKSKA CREKMRRERL NDRFLQLSSV LDPDRPPRSD KVSILGDAAR 120 LLMQLKTEAE QLKESNEKLE ETIKELKVEK NELRDEKTKL KADKERLEQQ LKAMSPPPPA 180 FMPHPMALHP AAASANAAFV AQQPQASSKA AAPYNAFPRM TMWQWLPPTV LDTTQDTKLW 240 SPNA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 4e-45 | bHLH family protein |