PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.3383
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 412aa    MW: 44954.4 Da    PI: 6.5094
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.3383genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.72.3e-2881136359
                                    -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                           WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                    DgynWrKYGqK+vkg + +rsYYrCt  +C++kkkver+  d++ +ei+Y+geHnh+
  evm.model.AsparagusV1_05.3383  81 DGYNWRKYGQKQVKGGDRSRSYYRCTNINCSAKKKVERCP-DGQETEIIYRGEHNHD 136
                                    9***************************************.***************7 PP
2WRKY106.61.2e-33253310259
                                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                     Dgy+WrKYGqK vkg+++prsYYrCt++gCpv+k+ver+++d k+v+itYeg+Hnh+
  evm.model.AsparagusV1_05.3383 253 GDGYRWRKYGQKIVKGNPNPRSYYRCTHSGCPVRKHVERASDDAKAVVITYEGNHNHD 310
                                    5********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MTHQAVLATV TAQAHMQLQA AYPPSSEALV SPSHSASVDP EPLQQKPPSV PENDVSTPET  60
VRPPPSEQKS QSTQIKTSSY DGYNWRKYGQ KQVKGGDRSR SYYRCTNINC SAKKKVERCP  120
DGQETEIIYR GEHNHDPPQK MKSMEEKGVQ SVGPSGENET LDLPSSQVYE SEPLTSKADH  180
NSGNGTPERQ LFCSSDCEGD AAVNTEEENA NEPYPKRRLI ETQSIVPYSA PVLKMIKEPK  240
IVVHSAFDAA HIGDGYRWRK YGQKIVKGNP NPRSYYRCTH SGCPVRKHVE RASDDAKAVV  300
ITYEGNHNHD QPPIKCGSDQ RNPAATSVTK DVQSRTSDSS VDNKPPTETN KEFSGDKASE  360
LGEEKALDSA QTLLSIGCNS TSGEKASGTN SDGVNRSLFS ENCSAVPVQN S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.26e-71WRKY family protein