PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.2117

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 541aa MW: 59201.9 Da PI: 5.5371

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.2117	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102	3.4e-32	279	336	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnhek evm.model.AsparagusV1_05.2117 279 EDGYNWRKYGQKHVKGSEYPRSYYKCTHPSCPVKKKVERSH-EGHITEIIYKGAHNHEK 336 8**************************************.*************85 PP
2	WRKY	103.7	9.9e-33	466	524	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver+++d k v++tYeg+Hnh+ evm.model.AsparagusV1_05.2117 466 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHD 524 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MDEKMTIIED WAPLNPSPRT FMANFLNEEF NSKSFPDLSA ENRSEKPLSQ SESQKVSMIS 60 KEESNENEFN FCTNMSIESS LFDGRKSSSK GGLAQRIARS GFNAPTINTA RIKSANMSSS 120 PSEVRSPYLT IPPGLSPTTL LDSPVFLSNS MAQPSPTTGK LSFSGNESAD PDKSKDNLPE 180 DVAFGGFAFK PPRNASSSSY FSSMETKSSD LSFQKHFNIP ASVSESSDTK ACADDNSICL 240 RPTDSFVGNE NSSPLEDQPE GEADTKAEFS SSAVAAPAED GYNWRKYGQK HVKGSEYPRS 300 YYKCTHPSCP VKKKVERSHE GHITEIIYKG AHNHEKPLPN RRSGVPSSHP FSDSQMEANF 360 DGKMPVWAEN TTTSSSIAAE FGDQTQDGSR FGSPEAVEVS STVSNGEEEE EQVTHGSVSI 420 GGDVEGDETE SKRRKLDACA VEMSTASRAV REPRVVVQTT SEVDILDDGY RWRKYGQKVV 480 KGNPNPRSYY KCTNPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SGSXXXXQPF 540 *

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MDEKMTIIED WAPLNPSPRT FMANFLNEEF NSKSFPDLSA ENRSEKPLSQ SESQKVSMIS  60
KEESNENEFN FCTNMSIESS LFDGRKSSSK GGLAQRIARS GFNAPTINTA RIKSANMSSS  120
PSEVRSPYLT IPPGLSPTTL LDSPVFLSNS MAQPSPTTGK LSFSGNESAD PDKSKDNLPE  180
DVAFGGFAFK PPRNASSSSY FSSMETKSSD LSFQKHFNIP ASVSESSDTK ACADDNSICL  240
RPTDSFVGNE NSSPLEDQPE GEADTKAEFS SSAVAAPAED GYNWRKYGQK HVKGSEYPRS  300
YYKCTHPSCP VKKKVERSHE GHITEIIYKG AHNHEKPLPN RRSGVPSSHP FSDSQMEANF  360
DGKMPVWAEN TTTSSSIAAE FGDQTQDGSR FGSPEAVEVS STVSNGEEEE EQVTHGSVSI  420
GGDVEGDETE SKRRKLDACA VEMSTASRAV REPRVVVQTT SEVDILDDGY RWRKYGQKVV  480
KGNPNPRSYY KCTNPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SGSXXXXQPF  540
*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-148	WRKY family protein