PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.1729 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | GATA | ||||||||
Protein Properties | Length: 145aa MW: 15529.4 Da PI: 8.6579 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 47.7 | 2.2e-15 | 99 | 130 | 1 | 32 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32 C Cgtt+T+ WRrgp g ktLCnaCGl+y + evm.model.AsparagusV1_04.1729 99 CLECGTTNTTVWRRGPKGMKTLCNACGLRYWS 130 889**************************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MLLALMDSAN NMGSSSSPPS DLRYKGQKRK STATDDSVAV DRPHENEPGS SNTELDLSLS 60 LGPPKAHTNI AQNPAEPGNN DVPAQVQNPT PRAPAIRICL ECGTTNTTVW RRGPKGMKTL 120 CNACGLRYWS QEKLVSTLFS SKHP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18380.1 | 4e-12 | GATA family protein |