PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028550155.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family CAMTA
Protein Properties Length: 1005aa    MW: 114018 Da    PI: 5.8711
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028550155.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1177.81.4e-55201343116
            CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 
                     +e ++rwl++ ei++iL n++k+ ++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e++++fqr
  XP_028550155.1  20 QEaQHRWLRPIEICEILRNYHKFCIAPEPPNKPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDDENFQR 114
                     5559******************************************************************************************* PP

            CG-1  97 rcywlLeeelekivlvhyle 116
                     r+yw+Leeel +ivlvhy+ 
  XP_028550155.1 115 RSYWMLEEELMHIVLVHYRA 134
                     ******************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1005 aa     Download sequence    
MAEARISGVT LPLNLEQILQ EAQHRWLRPI EICEILRNYH KFCIAPEPPN KPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDDE NFQRRSYWML  120
EEELMHIVLV HYRAIKGSKA NFLQPREDGA IARIAHADSP AHSTSSANQS QSPSLATDLE  180
SPNSTHLSEF ENDSDIFQPS SRYNSFLKMQ QYGPWMKVVQ AGMDRLANES DGGLRFTGTK  240
PMNNDMASWH EILERCSTGL QSSTFDVIVA STCANTMVNF PRQNPVADIL NGGFLDAKED  300
VTTVVDKPML QFDDEVVDSL VPFNTRVENI QTSDVNHMKN QSDLSLIDYQ GLKKYDSFSR  360
WASNELGEVD DSQITLNSGI YWSTLESDSV IAESSVQNQE HFDTYLMSPL ISHDQLFSII  420
DFSPNWTYAE METKVLVKGK FFLNKEDVQK YRWSCMFGEI EVQADILADG TLCCHTPSHK  480
PGRVPFYVTC SNRLACSEIR EFEYKMSKMH ELGNTDSDGS DAYDIDLLFR LEKLLILEDF  540
DHSSPDCSHT RERPHINCTV CSMIMEVDDE LFNLFKHTPD EDLSHINAEN QLLEESLKEK  600
LHVWLLHKVG EDGKGPNVLD KEGQGVLHLA AALGYDWAIK PIIAAGVGIN FRDLHGWTAL  660
HWAAFFGRER TVVTLVALDA SPGALTDPTP EFPSGRTPAD LASQNGYKGI AGFLAESSLF  720
KHLRELTLKD SESCDLTESS GILGYHHGAD KGSSHHAFGG TETSLKDSLS AVRNATEAAA  780
RIYQVFRMQS FHRKKLTDYV DENCGVSNED ALSLIYVKSN KSGHHVMPVH TAAIKIQNKF  840
RGWKGRKEFL SIRQHIVKIQ AHVRGHQVRK HYRKILWSVG IVEKVILRWR RKGSGLRGFR  900
SEEPPEGPSN ENQVIKEDDY DFLQEGRKQT EARLEKALAR VKSMVQYPEA IDQYRRLLNV  960
VEELQESDFI QAETPNEIME PVGVVDLMLE LEGLLQDDPH MPPNW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0CAMTA family protein