![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028550155.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | CAMTA | ||||||||
Protein Properties | Length: 1005aa MW: 114018 Da PI: 5.8711 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 177.8 | 1.4e-55 | 20 | 134 | 3 | 116 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei++iL n++k+ ++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e++++fqr XP_028550155.1 20 QEaQHRWLRPIEICEILRNYHKFCIAPEPPNKPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDDENFQR 114 5559******************************************************************************************* PP CG-1 97 rcywlLeeelekivlvhyle 116 r+yw+Leeel +ivlvhy+ XP_028550155.1 115 RSYWMLEEELMHIVLVHYRA 134 ******************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 1005 aa Download sequence |
MAEARISGVT LPLNLEQILQ EAQHRWLRPI EICEILRNYH KFCIAPEPPN KPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDDE NFQRRSYWML 120 EEELMHIVLV HYRAIKGSKA NFLQPREDGA IARIAHADSP AHSTSSANQS QSPSLATDLE 180 SPNSTHLSEF ENDSDIFQPS SRYNSFLKMQ QYGPWMKVVQ AGMDRLANES DGGLRFTGTK 240 PMNNDMASWH EILERCSTGL QSSTFDVIVA STCANTMVNF PRQNPVADIL NGGFLDAKED 300 VTTVVDKPML QFDDEVVDSL VPFNTRVENI QTSDVNHMKN QSDLSLIDYQ GLKKYDSFSR 360 WASNELGEVD DSQITLNSGI YWSTLESDSV IAESSVQNQE HFDTYLMSPL ISHDQLFSII 420 DFSPNWTYAE METKVLVKGK FFLNKEDVQK YRWSCMFGEI EVQADILADG TLCCHTPSHK 480 PGRVPFYVTC SNRLACSEIR EFEYKMSKMH ELGNTDSDGS DAYDIDLLFR LEKLLILEDF 540 DHSSPDCSHT RERPHINCTV CSMIMEVDDE LFNLFKHTPD EDLSHINAEN QLLEESLKEK 600 LHVWLLHKVG EDGKGPNVLD KEGQGVLHLA AALGYDWAIK PIIAAGVGIN FRDLHGWTAL 660 HWAAFFGRER TVVTLVALDA SPGALTDPTP EFPSGRTPAD LASQNGYKGI AGFLAESSLF 720 KHLRELTLKD SESCDLTESS GILGYHHGAD KGSSHHAFGG TETSLKDSLS AVRNATEAAA 780 RIYQVFRMQS FHRKKLTDYV DENCGVSNED ALSLIYVKSN KSGHHVMPVH TAAIKIQNKF 840 RGWKGRKEFL SIRQHIVKIQ AHVRGHQVRK HYRKILWSVG IVEKVILRWR RKGSGLRGFR 900 SEEPPEGPSN ENQVIKEDDY DFLQEGRKQT EARLEKALAR VKSMVQYPEA IDQYRRLLNV 960 VEELQESDFI QAETPNEIME PVGVVDLMLE LEGLLQDDPH MPPNW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G22300.2 | 0.0 | CAMTA family protein |