PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027363618.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 421aa MW: 47090.4 Da PI: 7.3838

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027363618.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl XP_027363618.1 14 KGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	43	1e-13	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ ++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_027363618.1 67 RGAFSQQEENMIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SQQEENMIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPNTHKPLS EVESDKDKPP TTDKSNHKAS VGSNEVSLVD HQPKPIPTSS SSSNLTCSTP 180 PTQELFLDRF HDSSITTSCR PSDMVGSYFS FQQLNYGTNI GLSANSNTSL CFIPSSTSSS 240 QVMSDLNSTI TSTMLHSIFP TPTHIKPTVT LHSNNNNNPS ISSGDIDGVH NWETSNSTNK 300 NNGSSCNTQL ESSTNFIDNS TLTWGVTESM KVNKDVQMPL HAEQEEMKWS EYLNTPYILG 360 NTVQNQTSQS IYSEVKPEAG FVTDESCTSW HHSQQHPPAF QLSDIYTKDL PRFSVTFGQT 420 L

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGAF SQQEENMIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG  120
IDPNTHKPLS EVESDKDKPP TTDKSNHKAS VGSNEVSLVD HQPKPIPTSS SSSNLTCSTP  180
PTQELFLDRF HDSSITTSCR PSDMVGSYFS FQQLNYGTNI GLSANSNTSL CFIPSSTSSS  240
QVMSDLNSTI TSTMLHSIFP TPTHIKPTVT LHSNNNNNPS ISSGDIDGVH NWETSNSTNK  300
NNGSSCNTQL ESSTNFIDNS TLTWGVTESM KVNKDVQMPL HAEQEEMKWS EYLNTPYILG  360
NTVQNQTSQS IYSEVKPEAG FVTDESCTSW HHSQQHPPAF QLSDIYTKDL PRFSVTFGQT  420
L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	1e-123	MYB family protein