PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347244.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 322aa MW: 36521.7 Da PI: 8.9751

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	65.4	1.1e-20	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l d++k++G gtW+t +++ g++R++k+c++rw +yl XP_027347244.1 14 KGPWTPEEDEKLMDYIKKHGRGTWRTLPKHAGLNRCGKSCRLRWENYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.2	6.8e-17	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++eE+ l+++++ lG++ W++Ia+++ gRt++++k++w++ XP_027347244.1 67 RGKFSEEEERLIINLHSVLGNK-WAKIASHLR-GRTDNEIKNYWNT 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MGRSPCCEDS GVKKGPWTPE EDEKLMDYIK KHGRGTWRTL PKHAGLNRCG KSCRLRWENY 60 LRPDIKRGKF SEEEERLIIN LHSVLGNKWA KIASHLRGRT DNEIKNYWNT NIRKKLLQMG 120 IDPETHKPKT TFNHLMSLSQ FLSQLLCMSN FGLGSSMSPL NSPLSLHEDI TQLAKLQLLH 180 NMLQLMKNTS LINMGIPYLL RNQNLNPLPT LIKGTSIDQT KEPILIGQEY ANPTGNNPGL 240 LFSQAHGEPN LGVLGYNKSS INLQENQAEN LLPALVASCP RTINFNQIDR NFNTAQMSSS 300 TFEAWEKFLI DDDDGTSGSY WK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02940.1	2e-78	MYB family protein