PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336762.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 351aa MW: 37874.5 Da PI: 6.1886

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336762.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.2e-17	36	81	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G ++W++Iar + gR++k+c++rw + XP_027336762.1 36 KGPWSPEEDAILSRLVSKFGARNWSLIARGIA-GRSGKSCRLRWCNQ 81 79****************************.*********985 PP
2	Myb_DNA-binding	58.1	2e-18	88	132	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd ++v a++ +G++ W++Iar ++ gRt++ +k++w++ XP_027336762.1 88 RKPFTDEEDRIIVAAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 132 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MEPEEAAAAT ALDADGSGDE GLLGLGGGGG GRDRVKGPWS PEEDAILSRL VSKFGARNWS 60 LIARGIAGRS GKSCRLRWCN QLDPAVKRKP FTDEEDRIIV AAHAIHGNKW AAIARLLPGR 120 TDNAIKNHWN STLRRRGVEL DKIKLESGNL GEDISLDKAK ASSEDTLSCG DVNSLKSSEG 180 RDVSSGEIMD DKFEDKAQTE GQLHHEVRDP PTLFRPVARV SAFSVYHSYD GLQPSTSIQR 240 PVPMQGSILQ SSKPDMEFCK MLEGIYSDQP VPHQCGHGCC ATPKSKSSLL GPEFVEFSEP 300 PSFPNFELAA IAADISNLAW LKSGLENSSV KMMGDTSGRV ISNGSQVHIG H

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MEPEEAAAAT ALDADGSGDE GLLGLGGGGG GRDRVKGPWS PEEDAILSRL VSKFGARNWS  60
LIARGIAGRS GKSCRLRWCN QLDPAVKRKP FTDEEDRIIV AAHAIHGNKW AAIARLLPGR  120
TDNAIKNHWN STLRRRGVEL DKIKLESGNL GEDISLDKAK ASSEDTLSCG DVNSLKSSEG  180
RDVSSGEIMD DKFEDKAQTE GQLHHEVRDP PTLFRPVARV SAFSVYHSYD GLQPSTSIQR  240
PVPMQGSILQ SSKPDMEFCK MLEGIYSDQP VPHQCGHGCC ATPKSKSSLL GPEFVEFSEP  300
PSFPNFELAA IAADISNLAW LKSGLENSSV KMMGDTSGRV ISNGSQVHIG H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-108	MYB family protein