PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027333450.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 346aa MW: 38875.6 Da PI: 6.6248

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027333450.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.3e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd l+ ++++ G+g +W + ++++g++R++k+c++rw++yl XP_027333450.1 14 KGPWSPEEDAALKAYIEKNGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	39	1.9e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_027333450.1 69 GGFTEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAALKAYIE KNGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FTEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGR 120 RKQSNFNTKD TNGIEENSYS NALSSSALER LQLHMQLQSL QNPLSFYNNP ALWPKLHPFQ 180 EKMIQNLQSL NDGSNPVMQN ALPSPHVEQD GAKINNPQVA DILDNIPLNN REVPFVASGN 240 NNPMHSSLTP RAEAVEQTNN VGLQQLGALQ TELDDILNNR TMGLLEDHHM AEFDCFREMN 300 GSKDNLVWWS NDSDTKSASS NSWDSSTTPA LLTQGMFQDY ELGYSL

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAALKAYIE KNGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FTEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGR  120
RKQSNFNTKD TNGIEENSYS NALSSSALER LQLHMQLQSL QNPLSFYNNP ALWPKLHPFQ  180
EKMIQNLQSL NDGSNPVMQN ALPSPHVEQD GAKINNPQVA DILDNIPLNN REVPFVASGN  240
NNPMHSSLTP RAEAVEQTNN VGLQQLGALQ TELDDILNNR TMGLLEDHHM AEFDCFREMN  300
GSKDNLVWWS NDSDTKSASS NSWDSSTTPA LLTQGMFQDY ELGYSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	8e-90	MYB family protein