PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027330563.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 404aa MW: 44102.5 Da PI: 5.8414

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027330563.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	2.9e-17	51	96	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v+q+G ++W+ I+r ++ gR++k+c++rw + XP_027330563.1 51 KGPWSPEEDTVLSRLVAQFGARNWSMISRGVP-GRSGKSCRLRWCNQ 96 79****************************.*********985 PP
2	Myb_DNA-binding	58.4	1.6e-18	103	147	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T+eEd ++v a++ +G++ W++Iar ++ gRt++ +k++w++ XP_027330563.1 103 RKPFTEEEDSIIVSAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 147 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MTEEDRSAEP TARNGVAAEE LGGGGGEELE VAGVDAEVSV VGDGSVAGRV KGPWSPEEDT 60 VLSRLVAQFG ARNWSMISRG VPGRSGKSCR LRWCNQLDPS VKRKPFTEEE DSIIVSAHAI 120 HGNKWAAIAR LLPGRTDNAI KNHWNSTLKR RCMELGRYVP AHADVIEDGS FEKPKASSEE 180 TMSIRDINNN PEEVRNFMMD NENKPPRTDN ATVEGHPILF RPVARISAFS VYNPQGRPRT 240 GSCSKMFPRQ SPLIQSPKPN VGSCKLFDGI GCEPTVPLQC GHGCCATELR ESHSHRSLLG 300 PEFVDYLESP SSSSHELISI VTDLNNIAWI KSGLQNQSDG EIENITNLTA SQGIATASQT 360 SFLGQGLKND YMQFEEGPGK FLGVMQEVLS TKMARQHFAM PAEV

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MTEEDRSAEP TARNGVAAEE LGGGGGEELE VAGVDAEVSV VGDGSVAGRV KGPWSPEEDT  60
VLSRLVAQFG ARNWSMISRG VPGRSGKSCR LRWCNQLDPS VKRKPFTEEE DSIIVSAHAI  120
HGNKWAAIAR LLPGRTDNAI KNHWNSTLKR RCMELGRYVP AHADVIEDGS FEKPKASSEE  180
TMSIRDINNN PEEVRNFMMD NENKPPRTDN ATVEGHPILF RPVARISAFS VYNPQGRPRT  240
GSCSKMFPRQ SPLIQSPKPN VGSCKLFDGI GCEPTVPLQC GHGCCATELR ESHSHRSLLG  300
PEFVDYLESP SSSSHELISI VTDLNNIAWI KSGLQNQSDG EIENITNLTA SQGIATASQT  360
SFLGQGLKND YMQFEEGPGK FLGVMQEVLS TKMARQHFAM PAEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	5e-91	MYB family protein