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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026412588.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | WOX | ||||||||
Protein Properties | Length: 272aa MW: 29434.4 Da PI: 6.7778 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 48 | 2.1e-15 | 26 | 86 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ XP_026412588.1 26 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgAVGDANVFYWFQNRRSRSRR 86 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 107.7 | 7.1e-35 | 25 | 88 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q XP_026412588.1 25 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQ 88 589***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MEDQAPDHNN RNNHPSQGSN KSEPVRSRWT PKPEQILILE SIFNSGMVNP PKDETVRIRK 60 LLEKFGAVGD ANVFYWFQNR RSRSRRRQRQ IQAGLLNDSS NIRASNGLSI HYEPTSSSSS 120 SSCSSSSSTS SSSSNSSSPA CFANPSFSHP FLIGSSSSSS SSCGGGGGIG DNACVDDLFS 180 FSQQMGLSEI DQSSILCSSN TTNLHFQTGF ITVFINGVPT EVPNGPLDMK SMFGQDAMLV 240 HSSGVPVPFN EYGFSLQSLQ MGESYFLVSR SL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03660.1 | 8e-36 | WOX family protein |