PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405102.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TALE

Protein Properties

Length: 404aa MW: 46228.2 Da PI: 6.7767

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.3	2.7e-08	347	380	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ ++ LA+ ++L+++q+ +WF N+R ++ XP_026405102.1 347 WPYPTEGDKIALAEATDLDQKQINNWFINQRKRH 380 68*****************************885 PP
2	ELK	37.8	4e-13	300	321	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK+ LlrKY+gy++sLkqEFs XP_026405102.1 300 DLKDKLLRKYRGYISSLKQEFS 321 69*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MEDMYSLNHH HHHNPSVNYS SASDVVSSMS SSSSASSSPL LQENMQQLVS SINYQSLLLS 60 SSLAFQDHHH RVPIFGSDRF FSSSSANCNS VATAHEHHQT TITNHIHPEE DDTMTSMSMQ 120 KAKIASHPRY TSLLQAYIEC QKVGAPTEVA NMLDDIRRYH QDNIHGYFCS KQQHRNGLFS 180 ASRLGQDPEL DNFMETYCDI LKKYKMDLSR PFDEATSFLN KIELQLSHLS DSNSSKSNQH 240 HPAPPSTISI NPTCLSSDHE AGGGGSSEDE ISGGEIEIHQ DHHHNNQVVH QTMNRVEDRD 300 LKDKLLRKYR GYISSLKQEF SKKKKKGKLP KEARQALLNW WDIHNRWPYP TEGDKIALAE 360 ATDLDQKQIN NWFINQRKRH WKPSENMQFS VMDNHLSTPF YIED

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MEDMYSLNHH HHHNPSVNYS SASDVVSSMS SSSSASSSPL LQENMQQLVS SINYQSLLLS  60
SSLAFQDHHH RVPIFGSDRF FSSSSANCNS VATAHEHHQT TITNHIHPEE DDTMTSMSMQ  120
KAKIASHPRY TSLLQAYIEC QKVGAPTEVA NMLDDIRRYH QDNIHGYFCS KQQHRNGLFS  180
ASRLGQDPEL DNFMETYCDI LKKYKMDLSR PFDEATSFLN KIELQLSHLS DSNSSKSNQH  240
HPAPPSTISI NPTCLSSDHE AGGGGSSEDE ISGGEIEIHQ DHHHNNQVVH QTMNRVEDRD  300
LKDKLLRKYR GYISSLKQEF SKKKKKGKLP KEARQALLNW WDIHNRWPYP TEGDKIALAE  360
ATDLDQKQIN NWFINQRKRH WKPSENMQFS VMDNHLSTPF YIED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G70510.1	1e-78	TALE family protein