PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390616.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 242aa MW: 27283.4 Da PI: 9.7018

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.2	2.2e-21	90	149	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ XP_026390616.1 90 TRWNPTQEQIGILEMLYKGgMRTPNAQQIEQITDQLskygKIEGKNVFYWFQNHKARERQ 149 7***************99************************************97 PP
2	Wus_type_Homeobox	118.6	2.7e-38	90	151	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+lyk G+rtPn+++i++it +L++yGkie+kNVfyWFQN+kaRerqkq XP_026390616.1 90 TRWNPTQEQIGILEMLYKGGMRTPNAQQIEQITDQLSKYGKIEGKNVFYWFQNHKARERQKQ 151 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MKVHQLTRGF WEHEPSLTLG CKRLRPLAPK LITSPTSGSH DGSSVITSNT TSSLDIKSFI 60 RADSGPRRSP SSIDQEKRHS IQVEAQAGGT RWNPTQEQIG ILEMLYKGGM RTPNAQQIEQ 120 ITDQLSKYGK IEGKNVFYWF QNHKARERQK QKRSSLGLTP SPRTPTPPVN SINMDINGGV 180 ERSEEDNNYY YKRKYRSWGA GETGFQEGIN MLNRSPSSTS SSSEEEEGDK TLELFPLHPE 240 SR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	1e-66	WOX family protein