PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024960003.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family HB-other
Protein Properties Length: 762aa    MW: 83558.3 Da    PI: 4.6482
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024960003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox19.81.4e-061374655
                    S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS
        Homeobox  6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55
                    +f++ ++ e+e+  +   +  p +e    LA+k           +++ +qV +WFqNrR+  
  XP_024960003.1 13 RFNQAEIAEMEAILQAhkTAMPVREVLVSLAEKFsnseersgkiEVQMKQVWNWFQNRRYAI 74
                    58888899999998853477899999999999999999999999***************865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 762 aa     Download sequence    
MGRPPSNGGP SFRFNQAEIA EMEAILQAHK TAMPVREVLV SLAEKFSNSE ERSGKIEVQM  60
KQVWNWFQNR RYAIRAKAAK SPGKLNVTQM TRDDSAMVKG VPQATQPHGA SSATVRSLPQ  120
APQHPTGPSA VVRSFQQAPQ HPAAFSGRVA DNSQMEYEAK SARDGAWYDV STFLSHRSLE  180
TGDPEVLVRF AGFGAEEDEW VIVRKNVRQR SLPCESSECV AVLPADLILC FQEGKEQALY  240
FDAHVLDAQR RRHDVRGCRC RFLVRYDHDQ SEEIVALRKI CRRPETDYRL QQLHAVNESL  300
SANQNKNGAN NIHTVSTLRV YPPAEVQQKQ HKVEPVVPSL SAEVPQKRQK VESTFPAPPP  360
DGSQKHFKVE PAMVALSGVP QNQQRVQPAP PPRPPSEAPL YPNKVEPVLC LPSDQALVEP  420
HRVEPVVPCP SAQPSLEPNK VESVVPVPSA QDSAETQVAI MPTCSEKVPL ELHQVQPVMH  480
GPSTELSPTV VAPVEPKVAE SLKESMVSGT SVEVPSELEP ADDVSVVAQM ETKIAEPQKE  540
EPVVAVQVPS ELHEIQPMLS GLSTQVSVAA PLEPKVAEPQ KEELVSEVPS ELHQVQPMMP  600
GPLTEQVSIV APKIVEPQKE PMTPGDSIEV GSELHKVQPM MPVPLTQVLL AVAPMEANVG  660
EPQKEEPLEL RQVQPDELHT SVLEAIETKP EESVTTVEEI ETKAEEPVNS GNVIEQPKLA  720
EVMEGNVDDE EHAKDAENGN INEVGDPELQ VENAGTVEME EG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.11e-122HB-other family protein