PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024960003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | HB-other | ||||||||
Protein Properties | Length: 762aa MW: 83558.3 Da PI: 4.6482 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 19.8 | 1.4e-06 | 13 | 74 | 6 | 55 |
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55 +f++ ++ e+e+ + + p +e LA+k +++ +qV +WFqNrR+ XP_024960003.1 13 RFNQAEIAEMEAILQAhkTAMPVREVLVSLAEKFsnseersgkiEVQMKQVWNWFQNRRYAI 74 58888899999998853477899999999999999999999999***************865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 762 aa Download sequence |
MGRPPSNGGP SFRFNQAEIA EMEAILQAHK TAMPVREVLV SLAEKFSNSE ERSGKIEVQM 60 KQVWNWFQNR RYAIRAKAAK SPGKLNVTQM TRDDSAMVKG VPQATQPHGA SSATVRSLPQ 120 APQHPTGPSA VVRSFQQAPQ HPAAFSGRVA DNSQMEYEAK SARDGAWYDV STFLSHRSLE 180 TGDPEVLVRF AGFGAEEDEW VIVRKNVRQR SLPCESSECV AVLPADLILC FQEGKEQALY 240 FDAHVLDAQR RRHDVRGCRC RFLVRYDHDQ SEEIVALRKI CRRPETDYRL QQLHAVNESL 300 SANQNKNGAN NIHTVSTLRV YPPAEVQQKQ HKVEPVVPSL SAEVPQKRQK VESTFPAPPP 360 DGSQKHFKVE PAMVALSGVP QNQQRVQPAP PPRPPSEAPL YPNKVEPVLC LPSDQALVEP 420 HRVEPVVPCP SAQPSLEPNK VESVVPVPSA QDSAETQVAI MPTCSEKVPL ELHQVQPVMH 480 GPSTELSPTV VAPVEPKVAE SLKESMVSGT SVEVPSELEP ADDVSVVAQM ETKIAEPQKE 540 EPVVAVQVPS ELHEIQPMLS GLSTQVSVAA PLEPKVAEPQ KEELVSEVPS ELHQVQPMMP 600 GPLTEQVSIV APKIVEPQKE PMTPGDSIEV GSELHKVQPM MPVPLTQVLL AVAPMEANVG 660 EPQKEEPLEL RQVQPDELHT SVLEAIETKP EESVTTVEEI ETKAEEPVNS GNVIEQPKLA 720 EVMEGNVDDE EHAKDAENGN INEVGDPELQ VENAGTVEME EG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18380.1 | 1e-122 | HB-other family protein |