PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023917960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 232aa MW: 26958.4 Da PI: 10.0392 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100 | 9.3e-32 | 24 | 74 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyeys+ XP_023917960.1 24 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 74 79***********************************************95 PP | |||||||
2 | K-box | 106.8 | 2.6e-35 | 93 | 188 | 6 | 100 |
K-box 6 gks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++e +a+ +qqe++kL+++i+++q+ +Rh++Ge L+s+++keL++Le +Lek+++++R+kKne+ll++ie +qk+e elq+en++Lr+k++ XP_023917960.1 93 NPGsVAEINAQFYQQESSKLRRQIREIQNLNRHIVGEALSSMTFKELKNLEGRLEKGITRVRTKKNEMLLAEIEFMQKREVELQNENNYLRAKIA 187 33359999*************************************************************************************98 PP K-box 100 e 100 e XP_023917960.1 188 E 188 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MEFPNQALEG SSQRKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL 60 IVFSSRGRLY EYSNNSVRGT INRYKKVSTE SSNPGSVAEI NAQFYQQESS KLRRQIREIQ 120 NLNRHIVGEA LSSMTFKELK NLEGRLEKGI TRVRTKKNEM LLAEIEFMQK REVELQNENN 180 YLRAKIAENE RAQQQQGTNL MPETVYESVS SQTYDRNYLP ANLLESNHHY SR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58780.1 | 1e-105 | MIKC_MADS family protein |