PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023910685.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 246aa MW: 28528.5 Da PI: 8.6931 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96 | 1.6e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+ey++ XP_023910685.1 9 KRIENKINRQVTFSKRRGGLLKKAHEISVLCDAEVALIVFSHKGKLFEYAT 59 79***********************************************86 PP | |||||||
2 | K-box | 105 | 9.2e-35 | 76 | 174 | 2 | 100 |
K-box 2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 ++++ ++++++ + +++ e+++Lk+++e Lqr++Rh+lGedL++Ls+k+Lq+LeqqL+++lk+iRs+Kn+l++e+i++lq+kek++qe+n+ L + XP_023910685.1 76 AERQLVATDSELQGNWTMEYSRLKAKVELLQRNHRHYLGEDLDTLSFKQLQNLEQQLDTALKQIRSRKNQLMYESISDLQRKEKAIQEQNTILAN 170 56667777777889********************************************************************************* PP K-box 97 klee 100 k++e XP_023910685.1 171 KIKE 174 *987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRGGLLK KAHEISVLCD AEVALIVFSH KGKLFEYATD 60 SCMEKILERY ERYSYAERQL VATDSELQGN WTMEYSRLKA KVELLQRNHR HYLGEDLDTL 120 SFKQLQNLEQ QLDTALKQIR SRKNQLMYES ISDLQRKEKA IQEQNTILAN KIKEKEKTVA 180 QQAQAQAQWE QQNHGPNGSS SFMLPQPLPC LNIGGTHHEE APELRRNELE LTLEPIYSCH 240 LGCFAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-115 | MIKC_MADS family protein |