PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023894634.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 28284.1 Da PI: 10.0895 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.5 | 2.6e-31 | 24 | 73 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ XP_023894634.1 24 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 73 79***********************************************8 PP | |||||||
2 | K-box | 112.8 | 3.3e-37 | 92 | 188 | 4 | 100 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 s++ s++ea+++ +qqe+akL+ +i nLq+++R+++Ge+L++L++keL++Le++Le++++kiRskKnell+++ie++qk+e el+++n+ Lr+k+ XP_023894634.1 92 SNTGSVAEANTQFYQQESAKLRVQIGNLQNSNRQMMGESLSNLTVKELKSLESKLERGISKIRSKKNELLFAEIEYMQKREVELHNNNQLLRAKI 186 444459****************************************************************************************9 PP K-box 99 ee 100 +e XP_023894634.1 187 AE 188 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MVYPNQSMSL SPQRKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL 60 IVFSTRGRLY EYANNSVKST IERYKKACAD SSNTGSVAEA NTQFYQQESA KLRVQIGNLQ 120 NSNRQMMGES LSNLTVKELK SLESKLERGI SKIRSKKNEL LFAEIEYMQK REVELHNNNQ 180 LLRAKIAENE RNQQNLNVMP AGGGNYEFMQ TQQYDSRNFF QVNALQPNHQ YPREDQMSLQ 240 LVNKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-114 | MIKC_MADS family protein |