PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553568.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 929aa MW: 104310 Da PI: 6.7934

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	51.5	1.9e-16	13	55	76	118
CG-1 76 ggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 g+v vl+cyYah+een++fqrr+yw+Lee+l++ivlvhylev+ XP_023553568.1 13 GSVYVLQCYYAHGEENENFQRRTYWMLEEDLSHIVLVHYLEVQ 55 67899***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 929 aa Download sequence
MLQTQLFCIG QAGSVYVLQC YYAHGEENEN FQRRTYWMLE EDLSHIVLVH YLEVQSSRAN 60 LNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ ILSQTTEISL NSAQASEYED 120 AVSEYGNRES NVFHSFLGLQ RSNMESTSRE PCDPNYPAPL SENFTAFGGN GFPTSSDRSK 180 DSNHAESIHE LHKNLCFSSD NVLKSGATGI YSPHLQPSFS TSRPKILDNV PKQGDEIMGL 240 PFSDRCKRED FGNHLLAQED CEAILEGKSK FAKKQPLLNA ITTEALRKSD SFNQWMSREL 300 GDVKEASMQC NSGAHWNSVE NEVGNSSISS QAHQDTYMFS RSLSHEQLFS IIDFSPSWAY 360 EGSEIKVLIS GKFLRSKQEV ENLKWSCMFG EVEVPAEVIA NGVLRCFTPM HKAGRVPFYV 420 TRSNRLACSE VQNFEYRVKC IQDVEVMYDT SITNEALALR FVKLLCLSCS DTLIADPNSS 480 SDRSGFNKVR ELLKVDNSEW DQFMKPRWDE NVSLGSTKEL LLQRLLKDKL HVWLLQKVRE 540 GGRGPSVLDE HGQGVLHFAA ALNYDWALLP AVVAGINVNF RDANGWTALH WAAFFGRERT 600 VAALISLGAA PGALTDPSPK YPHGRTPADL ASSNGHKGIA GYLGESALSA HLESLNFDNK 660 KGKAVDTCGE KAVHTASERV ATPHQGNDMH ALSLKDSLAA VSNATQAAAR IHEVMRMQSF 720 QKKQLLDLSN YQPLSLLPVK RRNSGSHDEH AAAIRIQNKF RSWKGRKDFL IIRQRIVKIQ 780 AHVRGHQVRK NYRNIVWSVG ILEKVILRWR RKGSGLRGFK AEALSEDSSK QNPSVTEDDD 840 DEFLKKGRKQ TEERLQKALA RVKSMVQYPE ARDQYRRLLN VVTEMRQTKV KDGVVDNVDE 900 TADFDDLIDI EALLDEDAFL PNASSNFSV

Sequence ? help Back to Top

Protein Sequence Length: 929 aa Download sequence

MLQTQLFCIG QAGSVYVLQC YYAHGEENEN FQRRTYWMLE EDLSHIVLVH YLEVQSSRAN  60
LNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ ILSQTTEISL NSAQASEYED  120
AVSEYGNRES NVFHSFLGLQ RSNMESTSRE PCDPNYPAPL SENFTAFGGN GFPTSSDRSK  180
DSNHAESIHE LHKNLCFSSD NVLKSGATGI YSPHLQPSFS TSRPKILDNV PKQGDEIMGL  240
PFSDRCKRED FGNHLLAQED CEAILEGKSK FAKKQPLLNA ITTEALRKSD SFNQWMSREL  300
GDVKEASMQC NSGAHWNSVE NEVGNSSISS QAHQDTYMFS RSLSHEQLFS IIDFSPSWAY  360
EGSEIKVLIS GKFLRSKQEV ENLKWSCMFG EVEVPAEVIA NGVLRCFTPM HKAGRVPFYV  420
TRSNRLACSE VQNFEYRVKC IQDVEVMYDT SITNEALALR FVKLLCLSCS DTLIADPNSS  480
SDRSGFNKVR ELLKVDNSEW DQFMKPRWDE NVSLGSTKEL LLQRLLKDKL HVWLLQKVRE  540
GGRGPSVLDE HGQGVLHFAA ALNYDWALLP AVVAGINVNF RDANGWTALH WAAFFGRERT  600
VAALISLGAA PGALTDPSPK YPHGRTPADL ASSNGHKGIA GYLGESALSA HLESLNFDNK  660
KGKAVDTCGE KAVHTASERV ATPHQGNDMH ALSLKDSLAA VSNATQAAAR IHEVMRMQSF  720
QKKQLLDLSN YQPLSLLPVK RRNSGSHDEH AAAIRIQNKF RSWKGRKDFL IIRQRIVKIQ  780
AHVRGHQVRK NYRNIVWSVG ILEKVILRWR RKGSGLRGFK AEALSEDSSK QNPSVTEDDD  840
DEFLKKGRKQ TEERLQKALA RVKSMVQYPE ARDQYRRLLN VVTEMRQTKV KDGVVDNVDE  900
TADFDDLIDI EALLDEDAFL PNASSNFSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein