PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023547806.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 912aa MW: 103088 Da PI: 7.8011

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023547806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	166	6.3e-52	35	150	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rwl+++ei+aiL n++ + ++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ve +++yYah+ +nptf rr XP_023547806.1 35 EaSARWLRPNEIHAILCNYKYFVIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNVERIHVYYAHGLDNPTFVRR 129 4589***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e+k XP_023547806.1 130 CYWLLDKSLEHIVLVHYRETK 150 ****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 912 aa Download sequence
MSLSMKDDVQ GSLVGSEIHG FHTLQDLDVK NIREEASARW LRPNEIHAIL CNYKYFVIHV 60 KPVNLPKSGT IVLFDRKMLR NFRKDGHNWK KKKDGKTVKE AHEHLKVGNV ERIHVYYAHG 120 LDNPTFVRRC YWLLDKSLEH IVLVHYRETK ESSPSTSMNS NSGSVSNPST PWLLSEELDS 180 RATHVYSVGG NELSEPSDTT TVMAHEQRLH EINTLEWDEL LVMNEPLKPA MTKEDKLSCF 240 DQQNQVPINV ANKIFGVITS FNNPVESTGS ANSIGSVNMS LMGGQTNLNV ESRESIPINS 300 LDNLLNNGLQ SQDSLGQWIN EVITDSPGSV IDPAIEPSIS SVHNSYCDST LYHHQSSVEQ 360 IFNITEVSPA WAFSTEKTKI VIIGYFSDEY VHLAKSNISV VCGDTSINAD FVQPGVYRCL 420 VEPHSPGLVH LYLSLDGHKP ISQVLNFEYR APLLQVPEVT SEQILKWEEF QVQMRLAHLM 480 FSTSKSLSIM STKLSPTALN EAKKLAVKTS GISDGWIYLL KSVTENKTPI PHAREGVLEM 540 ILRSRLRDWL IERVAEGSKK STEFDVNGQG VIHLCAILGY TWAVHLFVWS GLSINFRDKS 600 GWTALHWAAY YGRERMVAAL LSVGAKPSLI TDPTSKNPLG YTAADLASMN GFNGLAAYLS 660 EKALVSHFED MSLAGNVSGS LETSTIPDTT NFDSVSEEQM YMKETLAAYR TAADAAARIQ 720 AAFREHSLKQ RTDAIELSTP EAEARGIIAA MKIQHAFRNF ETRKKMAAAA RIQYRFRTWK 780 IRKDFLNMRR QTIRIQAAFR GFQVRRQYRK IVWSVGIVEK AILRWRLKRK GFRGLQVAPA 840 EVTEDQETGM EEDFYRVSQK QAEERVERAV IRVQAMFRSK KVQEEYRRMK LTHAEAALEY 900 EELSHPDMKL NG

Sequence ? help Back to Top

Protein Sequence Length: 912 aa Download sequence

MSLSMKDDVQ GSLVGSEIHG FHTLQDLDVK NIREEASARW LRPNEIHAIL CNYKYFVIHV  60
KPVNLPKSGT IVLFDRKMLR NFRKDGHNWK KKKDGKTVKE AHEHLKVGNV ERIHVYYAHG  120
LDNPTFVRRC YWLLDKSLEH IVLVHYRETK ESSPSTSMNS NSGSVSNPST PWLLSEELDS  180
RATHVYSVGG NELSEPSDTT TVMAHEQRLH EINTLEWDEL LVMNEPLKPA MTKEDKLSCF  240
DQQNQVPINV ANKIFGVITS FNNPVESTGS ANSIGSVNMS LMGGQTNLNV ESRESIPINS  300
LDNLLNNGLQ SQDSLGQWIN EVITDSPGSV IDPAIEPSIS SVHNSYCDST LYHHQSSVEQ  360
IFNITEVSPA WAFSTEKTKI VIIGYFSDEY VHLAKSNISV VCGDTSINAD FVQPGVYRCL  420
VEPHSPGLVH LYLSLDGHKP ISQVLNFEYR APLLQVPEVT SEQILKWEEF QVQMRLAHLM  480
FSTSKSLSIM STKLSPTALN EAKKLAVKTS GISDGWIYLL KSVTENKTPI PHAREGVLEM  540
ILRSRLRDWL IERVAEGSKK STEFDVNGQG VIHLCAILGY TWAVHLFVWS GLSINFRDKS  600
GWTALHWAAY YGRERMVAAL LSVGAKPSLI TDPTSKNPLG YTAADLASMN GFNGLAAYLS  660
EKALVSHFED MSLAGNVSGS LETSTIPDTT NFDSVSEEQM YMKETLAAYR TAADAAARIQ  720
AAFREHSLKQ RTDAIELSTP EAEARGIIAA MKIQHAFRNF ETRKKMAAAA RIQYRFRTWK  780
IRKDFLNMRR QTIRIQAAFR GFQVRRQYRK IVWSVGIVEK AILRWRLKRK GFRGLQVAPA  840
EVTEDQETGM EEDFYRVSQK QAEERVERAV IRVQAMFRSK KVQEEYRRMK LTHAEAALEY  900
EELSHPDMKL NG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein