PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023543016.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 477aa MW: 53469.3 Da PI: 6.3339

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023543016.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.6e-30	237	296	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_023543016.1 237 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 296 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MEIDLSLKID HHKQEPNQEH QEQDEHEEHE EHEAYRVREK KGVDDTEIHV AASTLKVFLP 60 QHNVNVGEIS ELQMEMNRMK EENKMLRKEV EQTMKDYYDL EMKIAIIQQN NLQKKDSHNF 120 LPSHENENKR VEEPNRELEL GEMAKKRRVR SPSKDNEMRE SELGLSLGLH TNNDLEEDND 180 HKDQEEETRE KSKEHVTSNM KAMQQSKPQR PELQGMAPPH NRKARVSVRA RCEAATMNDG 240 CQWRKYGQKI AKGNPCPRAY YRCTVAPGCP VRKQVQRCLE DMSILITTYE GTHNHPLPVG 300 ATAMASTASA AASFTLLDST NLPLPNPQNP NNILNSSSYS ANPNHPSAGL LLNLTANNFY 360 APMATASTSA AHNSYYQNNF QANFFSRPLD GRTWKSAAEE NKQPLVGESV SAIASDPKFR 420 VAVAEAISSL INKDGNLTAP NSVKRSSFGT EKDGDGGDSG GGNNSWVVQS LSTNGNL

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MEIDLSLKID HHKQEPNQEH QEQDEHEEHE EHEAYRVREK KGVDDTEIHV AASTLKVFLP  60
QHNVNVGEIS ELQMEMNRMK EENKMLRKEV EQTMKDYYDL EMKIAIIQQN NLQKKDSHNF  120
LPSHENENKR VEEPNRELEL GEMAKKRRVR SPSKDNEMRE SELGLSLGLH TNNDLEEDND  180
HKDQEEETRE KSKEHVTSNM KAMQQSKPQR PELQGMAPPH NRKARVSVRA RCEAATMNDG  240
CQWRKYGQKI AKGNPCPRAY YRCTVAPGCP VRKQVQRCLE DMSILITTYE GTHNHPLPVG  300
ATAMASTASA AASFTLLDST NLPLPNPQNP NNILNSSSYS ANPNHPSAGL LLNLTANNFY  360
APMATASTSA AHNSYYQNNF QANFFSRPLD GRTWKSAAEE NKQPLVGESV SAIASDPKFR  420
VAVAEAISSL INKDGNLTAP NSVKRSSFGT EKDGDGGDSG GGNNSWVVQS LSTNGNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	8e-65	WRKY family protein