PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023530552.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 1089aa MW: 121408 Da PI: 6.018

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023530552.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	181.2	1.2e-56	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ ++rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYah+een++fqr XP_023530552.1 20 IEARHRWLRPAEICEILRNYPKFHIASEPPERPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_023530552.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1089 aa Download sequence
MADRGSYGLA PRLDIDQLLI EARHRWLRPA EICEILRNYP KFHIASEPPE RPSSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP MSSSYSSSRN QAAFENADSP 180 SPTSTVTSSY EDADTDTYQE TSRFHSFSTS PLVNNGLLVN KKEAGASNLY FPHSSSNNVE 240 AWPSAPAVEY VPQVQKDGLS SDGGTGVIGS QKTLTSASWE EIFQQCTTGF QTVPSQVLNS 300 WIEPLSSGTV LGQENSIPGK LLAGNSAIKE DFKSSLTMAS TCQVPFEDNT SSFSKGHVDQ 360 FPDLYSVYDI NGKLTEQKSH NATFGSGHAH PSIENKELFS KNFEPQFNEG ELYSATRLNS 420 ENDISKEGSI SYSLALKQSL VDGEESLKKV DSFSRWVSRE LVEVDDLHMH PSSGLSWSTV 480 ECGDMVDDSS LSPSLSEDQL FSITDFSPKS TLLDLETEVV IIGKFLGNNH ATKCYWSCMF 540 GEVEVPAEVL ADGILCCHAP PHSVGQVPFY VTCSNRLACS EVREFDYLAD SAHDVDVTDV 600 YTAGATEELH MHLRFERLLS TRSSDPPNNL SEGALEKRNL IKKLISIKEE EDCYGEEPNS 660 QNDQNQHQSK ESLFIKLMKE KLYSWLIRKV IEDGKGPNIL DDKGQGLIHL AAALGYDWAI 720 RPIVATGVSL NFRDVNGWTA LHWAAFYGRE LTVGTLITLG ADPGLPSDPS PGNPSGTTPA 780 DLASVRGQKG IAGFLAESSL TSYISSVSMA DTKKDGVLDA SEGKAVYTAA ERKATPINDG 840 FMPGDLSLKD SLTAVCNATQ AADRIHLMFR VKSFQRKQLS ERGPDEFGYS DDSAISFVAA 900 RARKSRLSNS PDHAAAVHIQ KKFRGWKMRK EFLLIRQRIV KIQAIVRGHQ VRKQYKKIVW 960 SVGILDKIIL RWRRKGSGLR GFRSDTVAKT PPSVVMEPRE EDDEDFLKKG RRQTEERFQK 1020 ALTRVKSMAQ YPEGRDQYRR LLTVVQKCRE TKVSNISITS TSEEIIEGDD MIDIDSLLDD 1080 DALMSMTFD

Sequence ? help Back to Top

Protein Sequence Length: 1089 aa Download sequence

MADRGSYGLA PRLDIDQLLI EARHRWLRPA EICEILRNYP KFHIASEPPE RPSSGSLFLF  60
DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP MSSSYSSSRN QAAFENADSP  180
SPTSTVTSSY EDADTDTYQE TSRFHSFSTS PLVNNGLLVN KKEAGASNLY FPHSSSNNVE  240
AWPSAPAVEY VPQVQKDGLS SDGGTGVIGS QKTLTSASWE EIFQQCTTGF QTVPSQVLNS  300
WIEPLSSGTV LGQENSIPGK LLAGNSAIKE DFKSSLTMAS TCQVPFEDNT SSFSKGHVDQ  360
FPDLYSVYDI NGKLTEQKSH NATFGSGHAH PSIENKELFS KNFEPQFNEG ELYSATRLNS  420
ENDISKEGSI SYSLALKQSL VDGEESLKKV DSFSRWVSRE LVEVDDLHMH PSSGLSWSTV  480
ECGDMVDDSS LSPSLSEDQL FSITDFSPKS TLLDLETEVV IIGKFLGNNH ATKCYWSCMF  540
GEVEVPAEVL ADGILCCHAP PHSVGQVPFY VTCSNRLACS EVREFDYLAD SAHDVDVTDV  600
YTAGATEELH MHLRFERLLS TRSSDPPNNL SEGALEKRNL IKKLISIKEE EDCYGEEPNS  660
QNDQNQHQSK ESLFIKLMKE KLYSWLIRKV IEDGKGPNIL DDKGQGLIHL AAALGYDWAI  720
RPIVATGVSL NFRDVNGWTA LHWAAFYGRE LTVGTLITLG ADPGLPSDPS PGNPSGTTPA  780
DLASVRGQKG IAGFLAESSL TSYISSVSMA DTKKDGVLDA SEGKAVYTAA ERKATPINDG  840
FMPGDLSLKD SLTAVCNATQ AADRIHLMFR VKSFQRKQLS ERGPDEFGYS DDSAISFVAA  900
RARKSRLSNS PDHAAAVHIQ KKFRGWKMRK EFLLIRQRIV KIQAIVRGHQ VRKQYKKIVW  960
SVGILDKIIL RWRRKGSGLR GFRSDTVAKT PPSVVMEPRE EDDEDFLKKG RRQTEERFQK  1020
ALTRVKSMAQ YPEGRDQYRR LLTVVQKCRE TKVSNISITS TSEEIIEGDD MIDIDSLLDD  1080
DALMSMTFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein