PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528086.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 952aa MW: 106241 Da PI: 7.0685

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176	4.8e-55	20	135	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei++iL n++k++l+ +++ +p+ gsl+L++rk +ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n +fqr XP_023528086.1 20 QEaQNRWLRPAEICEILRNYQKFQLAPDPPVQPPAGSLFLFDRKALRYFRKDGHKWRKKKDGKTVKEAHEKLKSGSVDVLHCYYAHGEDNDNFQR 114 5559***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylev 117 r+yw+L+e+le+ivlvhy+ev XP_023528086.1 115 RSYWMLDEQLEHIVLVHYREV 135 *****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 952 aa Download sequence
MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF 60 DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML 120 DEQLEHIVLV HYREVNEGYR SGVSRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP 180 LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGSSDLCG QEIVIIQSAI 240 TDSITHKLID ARLASSGLVK NMVNSGHGLI ADAEVPAAKA VSQRIVQVVD DSFVQVEKTS 300 KYDLNHEGFG ELKKLDSFGR WMDKEIGRDC DDSLMTLDSG NYWCALDAGN DEKEVSSLSH 360 HMQLDIDSLG PSLSQDQLFS ISDFSPDWAY SGNVTKVLIV GSFLGSKKLP VETQWGCMFG 420 EVEVSAEILS NSVLRCQTPL HAPGRIPFYV TCCNRLACSE VREFEFREKP PTLSVPNAIK 480 CASEDELRFQ MRLTRLLNLC LEEKWLDCPI KNCEKCKIVG LMKSSRSDIA KWRMMEGISI 540 PLISDGMDPR DFMIQTLLVD KLCEWLACKV HEGTMGTPVL DEEGLGVIHL AAALGYAWTI 600 GPIIASGVSP NFRDSKGRTA LHWASYFGRE ETVATLVRLG VSPGAVDDPT SGFPGGQTAA 660 DLASSRGHKG IAGYLAEADL TAHLRSLTDG ENLKDNVKEN VNVDETIQTA DVVSSQLAED 720 ELLSLKGSLA AVRKSVHAAA LIHAAFRARS FRHKQLMGSD KEMIHEESID LVALGILNKA 780 EKIHYEDYLH VAAVRIQQNY RGWKGRKEFL KIRNRIVKIQ AHVRGYQVRK LYRKVIWTVS 840 IVEKAILRWR RKRVGLRGFK AEGATGEVAS SHSQVEKSDD YEFLRIGRQL KYADVEKALS 900 RVKSMARSPE ARHQYMRLVT KFHIFKINDE EPSGSNEDGS SQEIQKEEQN LA

Sequence ? help Back to Top

Protein Sequence Length: 952 aa Download sequence

MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF  60
DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML  120
DEQLEHIVLV HYREVNEGYR SGVSRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP  180
LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGSSDLCG QEIVIIQSAI  240
TDSITHKLID ARLASSGLVK NMVNSGHGLI ADAEVPAAKA VSQRIVQVVD DSFVQVEKTS  300
KYDLNHEGFG ELKKLDSFGR WMDKEIGRDC DDSLMTLDSG NYWCALDAGN DEKEVSSLSH  360
HMQLDIDSLG PSLSQDQLFS ISDFSPDWAY SGNVTKVLIV GSFLGSKKLP VETQWGCMFG  420
EVEVSAEILS NSVLRCQTPL HAPGRIPFYV TCCNRLACSE VREFEFREKP PTLSVPNAIK  480
CASEDELRFQ MRLTRLLNLC LEEKWLDCPI KNCEKCKIVG LMKSSRSDIA KWRMMEGISI  540
PLISDGMDPR DFMIQTLLVD KLCEWLACKV HEGTMGTPVL DEEGLGVIHL AAALGYAWTI  600
GPIIASGVSP NFRDSKGRTA LHWASYFGRE ETVATLVRLG VSPGAVDDPT SGFPGGQTAA  660
DLASSRGHKG IAGYLAEADL TAHLRSLTDG ENLKDNVKEN VNVDETIQTA DVVSSQLAED  720
ELLSLKGSLA AVRKSVHAAA LIHAAFRARS FRHKQLMGSD KEMIHEESID LVALGILNKA  780
EKIHYEDYLH VAAVRIQQNY RGWKGRKEFL KIRNRIVKIQ AHVRGYQVRK LYRKVIWTVS  840
IVEKAILRWR RKRVGLRGFK AEGATGEVAS SHSQVEKSDD YEFLRIGRQL KYADVEKALS  900
RVKSMARSPE ARHQYMRLVT KFHIFKINDE EPSGSNEDGS SQEIQKEEQN LA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	0.0	CAMTA family protein