PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528085.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 957aa MW: 106727 Da PI: 6.9983

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528085.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176	4.9e-55	20	135	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei++iL n++k++l+ +++ +p+ gsl+L++rk +ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n +fqr XP_023528085.1 20 QEaQNRWLRPAEICEILRNYQKFQLAPDPPVQPPAGSLFLFDRKALRYFRKDGHKWRKKKDGKTVKEAHEKLKSGSVDVLHCYYAHGEDNDNFQR 114 5559***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylev 117 r+yw+L+e+le+ivlvhy+ev XP_023528085.1 115 RSYWMLDEQLEHIVLVHYREV 135 *****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 957 aa Download sequence
MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF 60 DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML 120 DEQLEHIVLV HYREVNEGYR SGVSRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP 180 LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGDVSGSS DLCGQEIVII 240 QSAITDSITH KLIDARLASS GLVKNMVNSG HGLIADAEVP AAKAVSQRIV QVVDDSFVQV 300 EKTSKYDLNH EGFGELKKLD SFGRWMDKEI GRDCDDSLMT LDSGNYWCAL DAGNDEKEVS 360 SLSHHMQLDI DSLGPSLSQD QLFSISDFSP DWAYSGNVTK VLIVGSFLGS KKLPVETQWG 420 CMFGEVEVSA EILSNSVLRC QTPLHAPGRI PFYVTCCNRL ACSEVREFEF REKPPTLSVP 480 NAIKCASEDE LRFQMRLTRL LNLCLEEKWL DCPIKNCEKC KIVGLMKSSR SDIAKWRMME 540 GISIPLISDG MDPRDFMIQT LLVDKLCEWL ACKVHEGTMG TPVLDEEGLG VIHLAAALGY 600 AWTIGPIIAS GVSPNFRDSK GRTALHWASY FGREETVATL VRLGVSPGAV DDPTSGFPGG 660 QTAADLASSR GHKGIAGYLA EADLTAHLRS LTDGENLKDN VKENVNVDET IQTADVVSSQ 720 LAEDELLSLK GSLAAVRKSV HAAALIHAAF RARSFRHKQL MGSDKEMIHE ESIDLVALGI 780 LNKAEKIHYE DYLHVAAVRI QQNYRGWKGR KEFLKIRNRI VKIQAHVRGY QVRKLYRKVI 840 WTVSIVEKAI LRWRRKRVGL RGFKAEGATG EVASSHSQVE KSDDYEFLRI GRQLKYADVE 900 KALSRVKSMA RSPEARHQYM RLVTKFHIFK QINDEEPSGS NEDGSSQEIQ KEEQNLA

Sequence ? help Back to Top

Protein Sequence Length: 957 aa Download sequence

MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF  60
DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML  120
DEQLEHIVLV HYREVNEGYR SGVSRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP  180
LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGDVSGSS DLCGQEIVII  240
QSAITDSITH KLIDARLASS GLVKNMVNSG HGLIADAEVP AAKAVSQRIV QVVDDSFVQV  300
EKTSKYDLNH EGFGELKKLD SFGRWMDKEI GRDCDDSLMT LDSGNYWCAL DAGNDEKEVS  360
SLSHHMQLDI DSLGPSLSQD QLFSISDFSP DWAYSGNVTK VLIVGSFLGS KKLPVETQWG  420
CMFGEVEVSA EILSNSVLRC QTPLHAPGRI PFYVTCCNRL ACSEVREFEF REKPPTLSVP  480
NAIKCASEDE LRFQMRLTRL LNLCLEEKWL DCPIKNCEKC KIVGLMKSSR SDIAKWRMME  540
GISIPLISDG MDPRDFMIQT LLVDKLCEWL ACKVHEGTMG TPVLDEEGLG VIHLAAALGY  600
AWTIGPIIAS GVSPNFRDSK GRTALHWASY FGREETVATL VRLGVSPGAV DDPTSGFPGG  660
QTAADLASSR GHKGIAGYLA EADLTAHLRS LTDGENLKDN VKENVNVDET IQTADVVSSQ  720
LAEDELLSLK GSLAAVRKSV HAAALIHAAF RARSFRHKQL MGSDKEMIHE ESIDLVALGI  780
LNKAEKIHYE DYLHVAAVRI QQNYRGWKGR KEFLKIRNRI VKIQAHVRGY QVRKLYRKVI  840
WTVSIVEKAI LRWRRKRVGL RGFKAEGATG EVASSHSQVE KSDDYEFLRI GRQLKYADVE  900
KALSRVKSMA RSPEARHQYM RLVTKFHIFK QINDEEPSGS NEDGSSQEIQ KEEQNLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.1	0.0	CAMTA family protein