PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528081.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 976aa MW: 108813 Da PI: 7.1545

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528081.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176	5e-55	20	135	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei++iL n++k++l+ +++ +p+ gsl+L++rk +ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n +fqr XP_023528081.1 20 QEaQNRWLRPAEICEILRNYQKFQLAPDPPVQPPAGSLFLFDRKALRYFRKDGHKWRKKKDGKTVKEAHEKLKSGSVDVLHCYYAHGEDNDNFQR 114 5559***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylev 117 r+yw+L+e+le+ivlvhy+ev XP_023528081.1 115 RSYWMLDEQLEHIVLVHYREV 135 *****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 976 aa Download sequence
MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF 60 DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML 120 DEQLEHIVLV HYREVNEGYR SGVSRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP 180 LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGDVSGSS DLCGQEIVII 240 QSAITDSITH KLIDARLASS GLVKNMVNSG HGLIADAEVP AAKAVSQRIV QKKKHGLITV 300 PLFGMCTDSQ VVDDSFVQVE KTSKYDLNHE GFGELKKLDS FGRWMDKEIG RDCDDSLMTL 360 DSGNYWCALD AGNDEKEVSS LSHHMQLDID SLGPSLSQDQ LFSISDFSPD WAYSGNVTKV 420 LIVGSFLGSK KLPVETQWGC MFGEVEVSAE ILSNSVLRCQ TPLHAPGRIP FYVTCCNRLA 480 CSEVREFEFR EKPPTLSVPN AIKCASEDEL RFQMRLTRLL NLCLEEKWLD CPIKNCEKCK 540 IVGLMKSSRS DIAKWRMMEG ISIPLISDGM DPRDFMIQTL LVDKLCEWLA CKVHEGTMGT 600 PVLDEEGLGV IHLAAALGYA WTIGPIIASG VSPNFRDSKG RTALHWASYF GREETVATLV 660 RLGVSPGAVD DPTSGFPGGQ TAADLASSRG HKGIAGYLAE ADLTAHLRSL TDGENLKDNV 720 KENVNVDETI QTADVVSSQL AEDELLSLKG SLAAVRKSVH AAALIHAAFR ARSFRHKQLM 780 GSDKEMIHEE SIDLVALGIL NKAEKIHYED YLHVAAVRIQ QNYRGWKGRK EFLKIRNRIV 840 KIQAHVRGYQ VRKLYRKVIW TVSIVEKAIL RWRRKRVGLR GFKAEGATGE VASSHSQVEK 900 SDDYEFLRIG RQLKYADVEK ALSRVKSMAR SPEARHQYMR LVTKFHIFKQ INDEEPSGSN 960 EDGSSQEIQK EEQNLA

Sequence ? help Back to Top

Protein Sequence Length: 976 aa Download sequence

MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF  60
DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML  120
DEQLEHIVLV HYREVNEGYR SGVSRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP  180
LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGDVSGSS DLCGQEIVII  240
QSAITDSITH KLIDARLASS GLVKNMVNSG HGLIADAEVP AAKAVSQRIV QKKKHGLITV  300
PLFGMCTDSQ VVDDSFVQVE KTSKYDLNHE GFGELKKLDS FGRWMDKEIG RDCDDSLMTL  360
DSGNYWCALD AGNDEKEVSS LSHHMQLDID SLGPSLSQDQ LFSISDFSPD WAYSGNVTKV  420
LIVGSFLGSK KLPVETQWGC MFGEVEVSAE ILSNSVLRCQ TPLHAPGRIP FYVTCCNRLA  480
CSEVREFEFR EKPPTLSVPN AIKCASEDEL RFQMRLTRLL NLCLEEKWLD CPIKNCEKCK  540
IVGLMKSSRS DIAKWRMMEG ISIPLISDGM DPRDFMIQTL LVDKLCEWLA CKVHEGTMGT  600
PVLDEEGLGV IHLAAALGYA WTIGPIIASG VSPNFRDSKG RTALHWASYF GREETVATLV  660
RLGVSPGAVD DPTSGFPGGQ TAADLASSRG HKGIAGYLAE ADLTAHLRSL TDGENLKDNV  720
KENVNVDETI QTADVVSSQL AEDELLSLKG SLAAVRKSVH AAALIHAAFR ARSFRHKQLM  780
GSDKEMIHEE SIDLVALGIL NKAEKIHYED YLHVAAVRIQ QNYRGWKGRK EFLKIRNRIV  840
KIQAHVRGYQ VRKLYRKVIW TVSIVEKAIL RWRRKRVGLR GFKAEGATGE VASSHSQVEK  900
SDDYEFLRIG RQLKYADVEK ALSRVKSMAR SPEARHQYMR LVTKFHIFKQ INDEEPSGSN  960
EDGSSQEIQK EEQNLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	0.0	CAMTA family protein