PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023514254.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 934aa MW: 105001 Da PI: 6.1331

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023514254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	174.1	2e-54	12	126	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwlk+ e+ iL+n+ek++lt+e++++p+sgsl+L+n++++r+frkDG+sw+kk+dg+tv E+he+LKvg+ e+l+cyYah+e+np+fqr XP_023514254.1 12 REaQTRWLKPPEVFFILQNYEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQR 106 55599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhyle 116 r+yw+L+ ++++ivlvhy++ XP_023514254.1 107 RSYWMLDPSFDHIVLVHYRD 126 ****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 934 aa Download sequence
MNVGYDINDL YREAQTRWLK PPEVFFILQN YEKYQLTEEA PKQPTSGSLF LFNKRVLRFF 60 RKDGHSWRKK RDGRTVGEAH ERLKVGNAEA LNCYYAHGEH NPNFQRRSYW MLDPSFDHIV 120 LVHYRDINEG RPGTESVPQL SPASASTFGS HSSQSFALEH RQSSLSPGSV EVSSDTGNRT 180 VGSNGADGQH EISELKNECE VSQALRRIEE QLSLNEDSLK DIDPFYGHEE RSNSNLIDYY 240 EMSNDDQFSV LQHSENAIHD NNYTSFEIQD ANEKHSDYAM AHEIMFDSEG TQPWGYALGS 300 RKTADLESQD RQSLLWNENE KSSSSLSKST TVDNEHYNLV HRRGKTSALL GSCTSSEYTS 360 PLDNHDVNSN YHIPFLTEDH GNSFEVDTSL IVPQVQKFII RQIVPEQGYA TENTKVIIIG 420 SFLCDPSESP WACMFGDIEV PLQIVQNGTL YCEAPPHLPG KVSFCITSGN REPCSEFREF 480 EYKMNVCSRC YSHSSGPTKS PEELLLLVRL VQLLLSDSNT VNSEVRSNYV KAGDDQWSSL 540 IEGLLVGSET PSDTVDWLLQ ELLKDKLHLW LASQPKDRHD PAGCSLSKKE QGIIHMIAGL 600 GYVWALNPIL SCGVNINFRD INGWTALHWA ARFGREKMVA SLIASGASAG SVTDPSAQDP 660 DGKTAASIAD IHGHKGLAGY LSEVALTTHL SSLTFEEGEL SKGSAEVEAE MTVNSISEGN 720 HTSTEDYTPL SDTLAAVRNA AQAAARIQSA FRAHSFRKRQ QKEAVFAACI DEYGIDPNDI 780 QGLLAMSKLK FSNRRDCNAA ALSIQKKYRG WKGRQEFLSI RQKVVKIQAH VRGYQVRKHY 840 KIICWAVGIL DKVVLRWRRK GVGLRGFRSD IESIDENEDD DIIKVFRKEK VEVTIDEAVS 900 RVRSMVNSLD ARQQYHRTLK GFREAKAELN GADR

Sequence ? help Back to Top

Protein Sequence Length: 934 aa Download sequence

MNVGYDINDL YREAQTRWLK PPEVFFILQN YEKYQLTEEA PKQPTSGSLF LFNKRVLRFF  60
RKDGHSWRKK RDGRTVGEAH ERLKVGNAEA LNCYYAHGEH NPNFQRRSYW MLDPSFDHIV  120
LVHYRDINEG RPGTESVPQL SPASASTFGS HSSQSFALEH RQSSLSPGSV EVSSDTGNRT  180
VGSNGADGQH EISELKNECE VSQALRRIEE QLSLNEDSLK DIDPFYGHEE RSNSNLIDYY  240
EMSNDDQFSV LQHSENAIHD NNYTSFEIQD ANEKHSDYAM AHEIMFDSEG TQPWGYALGS  300
RKTADLESQD RQSLLWNENE KSSSSLSKST TVDNEHYNLV HRRGKTSALL GSCTSSEYTS  360
PLDNHDVNSN YHIPFLTEDH GNSFEVDTSL IVPQVQKFII RQIVPEQGYA TENTKVIIIG  420
SFLCDPSESP WACMFGDIEV PLQIVQNGTL YCEAPPHLPG KVSFCITSGN REPCSEFREF  480
EYKMNVCSRC YSHSSGPTKS PEELLLLVRL VQLLLSDSNT VNSEVRSNYV KAGDDQWSSL  540
IEGLLVGSET PSDTVDWLLQ ELLKDKLHLW LASQPKDRHD PAGCSLSKKE QGIIHMIAGL  600
GYVWALNPIL SCGVNINFRD INGWTALHWA ARFGREKMVA SLIASGASAG SVTDPSAQDP  660
DGKTAASIAD IHGHKGLAGY LSEVALTTHL SSLTFEEGEL SKGSAEVEAE MTVNSISEGN  720
HTSTEDYTPL SDTLAAVRNA AQAAARIQSA FRAHSFRKRQ QKEAVFAACI DEYGIDPNDI  780
QGLLAMSKLK FSNRRDCNAA ALSIQKKYRG WKGRQEFLSI RQKVVKIQAH VRGYQVRKHY  840
KIICWAVGIL DKVVLRWRRK GVGLRGFRSD IESIDENEDD DIIKVFRKEK VEVTIDEAVS  900
RVRSMVNSLD ARQQYHRTLK GFREAKAELN GADR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein