PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023514064.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 884aa MW: 100943 Da PI: 7.9584

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023514064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	163.5	3.6e-51	35	150	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e + rwl+++ei+aiL n++ + ++ ++ + p+sg+++L+nrk++r+frkDG++wkkkkdgkt++E+he+LKvg+ve +++yYah+ +n+tf rr XP_023514064.1 35 EaSGRWLRPNEIHAILCNYKYFVIHVKPVNLPTSGTIVLFNRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNVERIHVYYAHGLDNTTFVRR 129 4478***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_023514064.1 130 CYWLLDKTLEHIVLVHYRETQ 150 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 884 aa Download sequence
MSLAMKADVQ GSLVGSEIHG FHTLQELDVT NIREEASGRW LRPNEIHAIL CNYKYFVIHV 60 KPVNLPTSGT IVLFNRKMLR NFRKDGHNWK KKKDGKTIKE AHEHLKVGNV ERIHVYYAHG 120 LDNTTFVRRC YWLLDKTLEH IVLVHYRETQ EVNFSPMHLQ LQSSPSMSMN SNSGSVSDPS 180 TPCLLSEELD SRDNHGYSVD ENERSEPRDT TTAMNHEQRL HEINTLEWDE LLVTDEPFKP 240 SMPKGDRFSY FDQRSQVPTN SKESIPITSL DNLLDDGLLQ SQDSFGRWIN EVITESPDTV 300 IDPAIIEPSI SSIHNSFTDP TLNHCQSSVM EQIFNITDIS PAWAFSTEKT KILITGYFHN 360 EYLHLANSNI LVVCGNASVN AGLIQPGVYR CVVQPHSTGL VNLFVSLDGH KPISQVLNFE 420 YRAPLLREPV VASEQIQKWE EFQVQMRLAH LLFSTSRSLS IMSTKLSSTS LNEARKFAVK 480 TSDISDSWIY LLNSIKENNT PFPQARDGVL EIILKSRLRE WLIERVAEGS KKSTDFDIKG 540 QGVIHLCAIL GYTWAIHLFS WSGLSINFRD KFGWTALHWA AYYGREKMVA VLLSVGAKPN 600 LVTDPSSKNP LGYIAADLAS MNGYDGLAAY LSEKALVSHF NDMSLAGNVR GSLETSTITN 660 VTNSDSISEE QMYMKETLAA YRTAADAAAR IQTAFRENSL KQRTQAIEFS TPEDEARGIV 720 AAMKIQHAYR NFESRKRMAA AARIQYRFRT WKIRKEFLNM RRHAIRIQAA FRGFQMRRQY 780 RKILWSVGVI DKAILRWRLK RKGFRGLQVA PAEVTEKQEI GVEEDFYHVS QKQAEERVEK 840 AVVRVQALFR SKKAQEEYRR MKLTYDEAAL EYEELSHPDM NLSS

Sequence ? help Back to Top

Protein Sequence Length: 884 aa Download sequence

MSLAMKADVQ GSLVGSEIHG FHTLQELDVT NIREEASGRW LRPNEIHAIL CNYKYFVIHV  60
KPVNLPTSGT IVLFNRKMLR NFRKDGHNWK KKKDGKTIKE AHEHLKVGNV ERIHVYYAHG  120
LDNTTFVRRC YWLLDKTLEH IVLVHYRETQ EVNFSPMHLQ LQSSPSMSMN SNSGSVSDPS  180
TPCLLSEELD SRDNHGYSVD ENERSEPRDT TTAMNHEQRL HEINTLEWDE LLVTDEPFKP  240
SMPKGDRFSY FDQRSQVPTN SKESIPITSL DNLLDDGLLQ SQDSFGRWIN EVITESPDTV  300
IDPAIIEPSI SSIHNSFTDP TLNHCQSSVM EQIFNITDIS PAWAFSTEKT KILITGYFHN  360
EYLHLANSNI LVVCGNASVN AGLIQPGVYR CVVQPHSTGL VNLFVSLDGH KPISQVLNFE  420
YRAPLLREPV VASEQIQKWE EFQVQMRLAH LLFSTSRSLS IMSTKLSSTS LNEARKFAVK  480
TSDISDSWIY LLNSIKENNT PFPQARDGVL EIILKSRLRE WLIERVAEGS KKSTDFDIKG  540
QGVIHLCAIL GYTWAIHLFS WSGLSINFRD KFGWTALHWA AYYGREKMVA VLLSVGAKPN  600
LVTDPSSKNP LGYIAADLAS MNGYDGLAAY LSEKALVSHF NDMSLAGNVR GSLETSTITN  660
VTNSDSISEE QMYMKETLAA YRTAADAAAR IQTAFRENSL KQRTQAIEFS TPEDEARGIV  720
AAMKIQHAYR NFESRKRMAA AARIQYRFRT WKIRKEFLNM RRHAIRIQAA FRGFQMRRQY  780
RKILWSVGVI DKAILRWRLK RKGFRGLQVA PAEVTEKQEI GVEEDFYHVS QKQAEERVEK  840
AVVRVQALFR SKKAQEEYRR MKLTYDEAAL EYEELSHPDM NLSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16940.1	0.0	CAMTA family protein