PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964204.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 218aa MW: 25010.7 Da PI: 6.9447

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964204.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.7	8.7e-30	11	58	3	50
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 ien + rqvtfskRrng++KKA+ELSvLCdaeva+iifs++gklye++ XP_022964204.1 11 IENATSRQVTFSKRRNGLMKKAFELSVLCDAEVALIIFSPRGKLYEFA 58 9**********************************************8 PP
2	K-box	76.9	5.2e-26	89	170	18	99
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++e+a L k+ie+L+ ++R++lGedL+s+s+ eLqq+e qLeks+ kiR++K e++ eqi++l++kek l+ en +L +k+e XP_022964204.1 89 HEEAATLMKKIEQLEVSKRKMLGEDLGSCSIDELQQVELQLEKSVCKIRARKVEVFEEQIKQLKHKEKLLEAENAKLLEKWE 170 579***************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MVRGKTQMRL IENATSRQVT FSKRRNGLMK KAFELSVLCD AEVALIIFSP RGKLYEFANS 60 SMQATLERYR KHAKTKEALD PPSLEHLNHE EAATLMKKIE QLEVSKRKML GEDLGSCSID 120 ELQQVELQLE KSVCKIRARK VEVFEEQIKQ LKHKEKLLEA ENAKLLEKWE SEAEGVKEVE 180 RGENLMNYAE SSSPSSEVET ELFIGPPETR PRTFLSLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	7e-71	MIKC_MADS family protein