PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022957636.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 214aa    MW: 24441.3 Da    PI: 9.8901
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022957636.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.27e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien +nrqvtfskRrng+lKKA+ELSvLCdaev+v+ifs++g+lye+ss
  XP_022957636.1  9 KRIENATNRQVTFSKRRNGLLKKAYELSVLCDAEVSVMIFSQKGRLYEFSS 59
                    79***********************************************96 PP

2K-box561.7e-1980171898
           K-box   8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     +  +e  +++++qe++   k++e+L+++q++llG +L+s+sl+e++++e+qL  sl++iR++K++l++eq  +l +k k l een +L +k 
  XP_022957636.1  80 AlRSEVYMQQMKQEADMTAKKMEQLETSQKKLLGRGLGSCSLEEIREIETQLILSLTRIRERKSQLFKEQRMKLIEKGKLLIEENIKLAAKC 171
                     34678889********************************************************************************9885 PP

Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MVRGKVEMKR IENATNRQVT FSKRRNGLLK KAYELSVLCD AEVSVMIFSQ KGRLYEFSST  60
DIHKSIQRYR WYGKDGQTNA LRSEVYMQQM KQEADMTAKK MEQLETSQKK LLGRGLGSCS  120
LEEIREIETQ LILSLTRIRE RKSQLFKEQR MKLIEKGKLL IEENIKLAAK CGTQPWEAEG  180
GGENEGGGIM SLLCTQNAQP SHINTKLFIG LPCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62165.32e-78MIKC_MADS family protein