PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955225.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 195aa MW: 22464.8 Da PI: 10.5491

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955225.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	84.5	6.4e-27	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqv+fskRrng+lKKA+EL vLCdaevav+ifs++gk y +ss XP_022955225.1 9 KRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSS 59 79***********************************************96 PP
2	K-box	67.8	3.7e-23	87	169	16	98
K-box 16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ e++ +++ i++L+ +Rh+ GedLe+L++keL++Le+qL +++++Rsk +++ e++++l+kk k lqee+ +L+k+l XP_022955225.1 87 VWKSEMEDMNRTISSLEARLRHFSGEDLEPLTIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRL 169 699*****************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MGRGKVEVKR IENPTSRQVS FSKRRNGVLK KAYELAVLCD AEVAVVIFSP SGKAYQFSSH 60 DIDGTLVRYR KYVGQSQFNH PLSRALVWKS EMEDMNRTIS SLEARLRHFS GEDLEPLTIK 120 ELKRLERQLS VGIERVRSKM RRIISEHTSQ LKKKYKGLQE EHSRLQKRLN QLKDVADTTT 180 RVSDADGVSV LEMFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26310.1	4e-44	MIKC_MADS family protein